DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbx5a and byn

DIOPT Version :9

Sequence 1:NP_001300611.1 Gene:tbx5a / 30071 ZFINID:ZDB-GENE-991124-7 Length:492 Species:Danio rerio
Sequence 2:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster


Alignment Length:455 Identity:141/455 - (30%)
Similarity:201/455 - (44%) Gaps:118/455 - (25%)


- Green bases have known domain annotations that are detailed below.


Zfish    53 IKVYLHERELWTKFHEVGTEMIITKAGRRMFPSFKVKVTGLNPKTKYILLMDVVPADDHRYKFAD 117
            :::.|.:||||.:|..:..|||:||.||||||..|:..:||:|...|.:|::.|..|.||:|:.:
  Fly    87 LRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVN 151

Zfish   118 NKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRI 182
            .:|...||||......:||||:||..|||||::.:||.|:||||. .:..|.|:|||:|||:||:
  Fly   152 GEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQIMLNSLHKYEPRV 215

Zfish   183 HIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDM------ 241
            |:|:.      ||:.....|:.||||.|||||:|||.::|.|||:.|||||.|..:.:.      
  Fly   216 HLVRV------GSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPDTLYP 274

Zfish   242 -----------ELHRMSRMQSTKEYPVVPRSTVRQRVGSSQSPFSGDVQGLSASGAISSQYSCEN 295
                       ..|..:...:....|.:..:.....|.|..|..|.:..|.|:.|      ||:.
  Fly   275 HDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGLVASCPSVSSAESVGPSSGG------SCDR 333

Zfish   296 -GVSSTSQDLLPQSSSYHEHTQDYHCIKRKVEDECPAGEHPYKKPYVESSSSEDDHYYRPLSYSQ 359
             |.|.:|:.:.|..::                        ||.:|.|.|.|.             
  Fly   334 YGRSLSSRSVAPTRTT------------------------PYSRPRVVSGSG------------- 361

Zfish   360 SLGLSGGAPYRPESSQRQACMYASAPQPPEPVPSLEDISWPGVPPYSVPQMERLPYQHHFSAHFA 424
            |.|.:|.|.             :::||||                 |.||...       |.|..
  Fly   362 SNGSAGNAS-------------STSPQPP-----------------SAPQTPT-------SLHST 389

Zfish   425 SRQMPEAHGMYASSVSHQCSPSGGIQS-PSAGLQGNEYLYAHGLQRTLSPHQYHTVHSVSIMHDW 488
            |.      |..::|||  .|..|||.| ||.|...:.|..:..:....||    |....|....|
  Fly   390 ST------GSVSTSVS--SSSGGGIGSAPSTGCFSSSYAQSGFMSVDASP----TASVFSYPSSW 442

Zfish   489  488
              Fly   443  442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbx5aNP_001300611.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
TBOX 52..240 CDD:238106 88/186 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..352 6/20 (30%)
bynNP_524031.2 TBOX 86..268 CDD:238106 88/187 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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