DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbx4 and bi

DIOPT Version :9

Sequence 1:NP_570989.2 Gene:tbx4 / 30070 ZFINID:ZDB-GENE-991124-5 Length:543 Species:Danio rerio
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:567 Identity:196/567 - (34%)
Similarity:270/567 - (47%) Gaps:147/567 - (25%)


- Green bases have known domain annotations that are detailed below.


Zfish    25 LASDSSHLGLPT-TPSNPQNNEPDQSIENIKVVLHDRELWKKFHEAGTEMIITKAGRRMFPSYKV 88
            |||..:|...|. .|......|.|..:::.||.|..::||:|||:.||||:|||:||:|||..|.
  Fly   299 LASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKF 363

Zfish    89 KVTGMNPKTKYILLTDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVS 153
            :|:|::.|.|||||.|||.|||:||||.:::|||||||:|.||.|:|:|||||.||..||:::||
  Fly   364 RVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVS 428

Zfish   154 FQKLKLTNNHLDPFGHI---ILNSMHKYQPRLHIVKADENNAFGSKNTAYCTHVFHETAFISVTS 215
            |.|||||||..|..|.:   |||||||||||.|:|:|  |:......:.:.|:||.||.||:||:
  Fly   429 FHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRA--NDILKLPYSTFRTYVFKETEFIAVTA 491

Zfish   216 YQNHKITQLKIENNPFAKGFRGSDEGDLRVSRLQGKDYPVISKNMVRQRLISSHGHLSGKLSAGV 280
            |||.|||||||:|||||||||.:..|                |...:|.|:|:.|..|.||:...
  Fly   492 YQNEKITQLKIDNNPFAKGFRDTGAG----------------KREKKQALMSNRGSDSDKLNPTH 540

Zfish   281 LSS------------------HPQVLSHYQYDSG-------------VPLPNS------------ 302
            :||                  |..:|.:.|.|..             :||.:|            
  Fly   541 VSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQSPLLPLSHSLQQMHAHQHSAA 605

Zfish   303 --------------DSQEALSNSFTSSREPSLLYHCFKHRDNPRHLELGCKRPYLDTTSSAVSEE 353
                          .|:.|.:.:..:|.|.:|........|..|           |.:.|:.||.
  Fly   606 LAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVER-----------DGSDSSCSES 659

Zfish   354 ------HYFRSPPSYDSPLLSHPYCNEALGSREACMYGGLEGEGGGAVGTDDLPAPSLNCNMWAS 412
                  ..|| |.|..||       .||:|:..|....|| ..|||:.       ||.|.::...
  Fly   660 VGGSTGGAFR-PTSTGSP-------KEAVGAAAAAAAAGL-NPGGGSY-------PSPNISVGPP 708

Zfish   413 VQPYPR-------YGMQTVEAMQYQPFTAHFNSTASAASMVSHHSPSMQRPHPTPPDLVTFTTQR 470
            :.|.|.       :|:..      .|.....::.|:||:|    ||:...|.      :.|..|.
  Fly   709 IHPSPHLLPYLYPHGLYP------PPHLGLLHNPAAAAAM----SPAGLNPG------LLFNAQL 757

Zfish   471 VLPPTPSSASTSPSGSGHHDRAHSSLFHRKAGSPLRSQRD--FTGYS 515
            .|      |:..|:..||   |:::..|... |||:..:.  |:.||
  Fly   758 AL------AAQHPALFGH---AYAAAGHTPV-SPLQGLKSHRFSPYS 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbx4NP_570989.2 TBOX 52..240 CDD:238106 115/190 (61%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 6/18 (33%)
T-box 330..513 CDD:279278 113/184 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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