Protein Alignment elavl1b and bru3

DIOPT Version :9

• Sequence 1: NP_570984.2
• Gene: elavl1b / 30065
• ZFINID: ZDB-GENE-000210-17
• Length: 360
• Species: Danio rerio
• Sequence 2: NP_001369050.1
• Gene: bru3 / 39527
• FlyBaseID: FBgn0264001
• Length: 552
• Species: Drosophila melanogaster
• Alignment Length: 384
• Identity: 88/384 - (22%)
• Similarity: 147/384 - (38%)
• Gaps: 82/384 - (21%)

Zfish    44 EDPMGDEPSDAKTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGYGFVNYVNPS 108
            |:....|..|.|  |.:..|.:..:::::|.:|...|.:|...::|.. .|.|.|..||.:.:..
  Fly    31 ENESRSEHLDRK--LFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGP-DGASKGCAFVKFGSQQ 92

Zfish   109 DAERAINTLNGLRLQ---SKTIKVSYARPSSDGIKDANL-YISGLPKTMTQKN--VEDMFTQYGR 167
            :|:.||..|:|.:..   |.::.|.||    |..|:..: .:..:...|...|  |.:.|:.||.
  Fly    93 EAQSAITNLHGSQTMPGASSSLVVKYA----DTEKERQIRRMQQMAGHMNLLNPFVFNQFSPYGA 153

Zfish   168 IINSR----ILVDQASGLSRGVAFIRFDKRSEAEEAIKDLNGS---------------------- 206
            ....:    ::...|:......|::. ...:.|.:....|||:
  Fly   154 YAQQQQQAALMAAAATAPGSAAAYMN-PMAALATQIPHGLNGTGQPPSLPSPTMPNFNMGANTPN 217

Zfish   207 -KPSGASEPITVKFAAN---------------------PNQSKNSQLLSQLYHTQSRRFGG---- 245
             :|.||:.......||:                     |.|...:...:.|.|.    |.|
  Fly   218 GQPGGAAAAAAAAAAADGVFTNGIPQTAFPGHPLHLTIPPQGLPNGDAATLQHA----FPGLPPF 278

Zfish   246 ------------PVHHQPQRFRFSPMSVDHSVSSMNVASSSSSGWCIFVYNLGQDADEGILWQMF 298
                        |....|.....:|...:..:.....:.|...|..:|:|:|.|:..:..|.|||
  Fly   279 PGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMF 343

Zfish   299 GPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSLNGYRLGDKVLQVSFKSSK 357
            .|||.|.:.||..|..|::.|.||||:..|...|..||.::||:::|.|.|:|..|..|
  Fly   344 LPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elavl1b	NP_570984.2	ELAV_HUD_SF	53..360	CDD:273741	86/375 (23%)
		RRM1_Hu	55..132	CDD:241094	20/79 (25%)
		RRM_SF	142..225	CDD:302621	18/133 (14%)
		RRM_SF	277..360	CDD:302621	34/81 (42%)
bru3	NP_001369050.1	RRM2_CELF3_4_5_6	40..120	CDD:410043	23/86 (27%)
		ELAV_HUD_SF	43..404	CDD:273741	84/370 (23%)
		RRM3_CELF3_4_5_6	319..397	CDD:241083	31/77 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910