Protein Alignment elavl1b and Rbp9

DIOPT Version :9

• Sequence 1: NP_570984.2
• Gene: elavl1b / 30065
• ZFINID: ZDB-GENE-000210-17
• Length: 360
• Species: Danio rerio
• Sequence 2: NP_001259974.1
• Gene: Rbp9 / 33498
• FlyBaseID: FBgn0010263
• Length: 684
• Species: Drosophila melanogaster
• Alignment Length: 365
• Identity: 203/365 - (55%)
• Similarity: 256/365 - (70%)
• Gaps: 39/365 - (10%)

Zfish    18 NQGNDRDSHKGASSIKQEVYDMPNGYEDPMGDEPSDAKTNLIINYLPQNMSQEELRSLFSSIGEV 82
            |..|:.:::..|::         |...:|      |.|||||:|||||.|||:|:||||.|.|||
  Fly    87 NTNNNNNNNATANN---------NNNNEP------DPKTNLIVNYLPQTMSQDEIRSLFVSFGEV 136

Zfish    83 ESAKLIRDKMAGHSLGYGFVNYVNPSDAERAINTLNGLRLQSKTIKVSYARPSSDGIKDANLYIS 147
            ||.||||||:.|.||||||||||...|||:|||.|||||||:||||||.|||||:.||.||||:|
  Fly   137 ESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQNKTIKVSIARPSSESIKGANLYVS 201

Zfish   148 GLPKTMTQKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIKDLNGSKPSGAS 212
            ||||.|||.::|.:|:.||:||.||||.|..:|||:||.|||||:|.||:.|||:|||:.|..::
  Fly   202 GLPKNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNST 266

Zfish   213 EPITVKFAANPNQSKNS-QLLSQLYHTQSRRFG-----------------GPVHHQPQRF----- 254
            ||||||||.||:.:||| |.|:.....|:.|.|                 ..:|....|:
  Fly   267 EPITVKFANNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVIS 331

Zfish   255 RFSPMSVDHSVSSMNVASS-SSSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKC 318
            |:||::.|...:.|...:: :|||||||||||..|.:|.:|||:|||||||.:||||||..::||
  Fly   332 RYSPLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKC 396

Zfish   319 KGFGFVTMTNYEEAAMAISSLNGYRLGDKVLQVSFKSSKS 358
            ||||||||||||||.:||.|||||.||::|||||||::|:
  Fly   397 KGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNKN 436

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elavl1b	NP_570984.2	ELAV_HUD_SF	53..360	CDD:273741	198/330 (60%)
		RRM1_Hu	55..132	CDD:241094	60/76 (79%)
		RRM_SF	142..225	CDD:302621	53/82 (65%)
		RRM_SF	277..360	CDD:302621	60/82 (73%)
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	198/330 (60%)
		RRM1_Hu	109..186	CDD:241094	60/76 (79%)
		RRM2_Hu	196..274	CDD:241096	49/77 (64%)
		RRM3_Hu	355..432	CDD:240823	57/76 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	123	1.000	Domainoid score	I5514
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	414	1.000	Inparanoid score	I1806
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm6531
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	9	9.070