DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAX and gsb

DIOPT Version :10

Sequence 1:NP_038463.2 Gene:RAX / 30062 HGNCID:18662 Length:346 Species:Homo sapiens
Sequence 2:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster


Alignment Length:303 Identity:90/303 - (29%)
Similarity:116/303 - (38%) Gaps:115/303 - (37%)


- Green bases have known domain annotations that are detailed below.


Human    14 SFSLAGHLLR-SPGGSTSRLHSIEAILGFTKDDGILGTFPAERGARGAKERDRRLGARPACPKAP 77
            |.|....||| |.|..||  |||         |||||   ...|:.|:::..             
  Fly   134 SVSSISRLLRGSSGSGTS--HSI---------DGILG---GGAGSVGSEDES------------- 171

Human    78 EEGSEPSPPPAPAPAPEYEAPRPYCPKEPGEARPSPGLPVGPATGEAKLSEEEQPKKKHRRNRTT 142
            |:.:|||                                             .|.|:|.||:|||
  Fly   172 EDDAEPS---------------------------------------------VQLKRKQRRSRTT 191

Human   143 FTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
            |:..|:..|||.|.::.|||||:|||||....|.|.||||||.||||:.|:|       :..|..
  Fly   192 FSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ-------LNTQQV 249

Human   208 PLL-----SFSRSP-PSATLSP-LG-------AGPGSG--------GGPAGGALPLESWLG---- 246
            |..     ||..:| .||..:| :|       :.|.||        ||......|..|..|    
  Fly   250 PSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSA 314

Human   247 --PPL------PGGGATALQSLPGFGPPAQSLP-ASYTPPPPP 280
              .|:      ||.|:..:.|..|.|....:.| |:|:.|..|
  Fly   315 AHSPVQTQAQQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTP 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAXNP_038463.2 Octapeptide motif 33..40 3/6 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..145 19/98 (19%)
Homeodomain 137..193 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..318 30/122 (25%)
OAR 319..335 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 323..336
Nuclear localization signal. /evidence=ECO:0000255 329..333
gsbNP_523863.1 PAX 19..143 CDD:128645 3/8 (38%)
Homeodomain 186..242 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

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