DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAX and prd

DIOPT Version :10

Sequence 1:NP_038463.2 Gene:RAX / 30062 HGNCID:18662 Length:346 Species:Homo sapiens
Sequence 2:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster


Alignment Length:260 Identity:85/260 - (32%)
Similarity:103/260 - (39%) Gaps:82/260 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   102 CPKEPGEARPSPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 166
            |..|||.|.                      |:|.||.||||:..||.|||||||::.|||:|:|
  Fly   201 CESEPGIAL----------------------KRKQRRCRTTFSASQLDELERAFERTQYPDIYTR 243

Human   167 EELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVS-----------SMKLQDSPLLSFSRSPPSAT 220
            ||||.:.||.|.|:||||.||||:.|:|. ..||           |.....|.|.|...|.||  
  Fly   244 EELAQRTNLTEARIQVWFSNRRARLRKQH-TSVSGGAPGGAAASVSHVAASSSLPSVVSSVPS-- 305

Human   221 LSPLGAGPGSGGGPAGGALPLESWLGPPLPGGGATALQ------------SLPGFGPPAQS--LP 271
            ::||...|||              |.|      ||..|            |:....|.|.|  .|
  Fly   306 MAPLAMMPGS--------------LDP------ATVYQQQYDFYGSHANISVSAAAPMASSNLSP 350

Human   272 ASYTPPPPPPPFLN-----SPPLGPGLQPLAPPP-----PSY--PCGPGFGDKFPLDEADPRNSS 324
            ...|.||....|.|     :..:.||......|.     .||  ..|..:|.:....:..|||.|
  Fly   351 GITTTPPHHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNES 415

Human   325  324
              Fly   416  415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAXNP_038463.2 Octapeptide motif 33..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..145 13/42 (31%)
Homeodomain 137..193 CDD:459649 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..318 37/160 (23%)
OAR 319..335 CDD:461067 4/6 (67%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 323..336 1/2 (50%)
Nuclear localization signal. /evidence=ECO:0000255 329..333
prdNP_723721.1 PAX 27..154 CDD:238076
Homeodomain 214..270 CDD:459649 36/55 (65%)
Blue background indicates that the domain is not in the aligned region.

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