DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scd3 and Desat2

DIOPT Version :9

Sequence 1:NP_077770.1 Gene:Scd3 / 30049 MGIID:1353437 Length:359 Species:Mus musculus
Sequence 2:NP_650201.1 Gene:Desat2 / 41536 FlyBaseID:FBgn0043043 Length:361 Species:Drosophila melanogaster


Alignment Length:338 Identity:177/338 - (52%)
Similarity:234/338 - (69%) Gaps:4/338 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse    22 APPSGSLQNGREKVKTVPLYLEEDIRPEMKEDIYDPTYQDEEGPPPKLEYVWRNIILMALLHVGA 86
            ||.|......:...:|..|:  ||....:..|:....:|.:.....:|..|||||||.||:|:.|
  Fly     2 APYSRIYHQDKSSRETGVLF--EDDAQTVDGDLTTDRFQLKRAEKRRLPLVWRNIILFALVHLAA 64

Mouse    87 LYGI-TLVPSCKLYTCLFAFVYYVISIEGIGAGVHRLWSHRTYKARLPLRIFLIIANTMAFQNDV 150
            |||: ::....||.|.|||...|:|.:.|:.||.||||:||||||:.|||:.|:|.||:|||:.|
  Fly    65 LYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHRLWAHRTYKAKWPLRLLLVIFNTIAFQDAV 129

Mouse   151 YEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQR 215
            |.||||||.|||:|||.|||||:.||||||||||||.:|||.:||||..||:|||:|:.::||||
  Fly   130 YHWARDHRVHHKYSETDADPHNATRGFFFSHVGWLLCKKHPDIKEKGRGLDLSDLRADPILMFQR 194

Mouse   216 RYYKPGILLMCFILPTLVPWYCWGETFLNSFYVATLLRYAVVLNATWLVNSAAHLYGYRPYDKNI 280
            ::|...:.|.||:|||::|...|.||..:|::|||:.|:...||.|||||||||.:|.|||||.:
  Fly   195 KHYYILMPLACFVLPTVIPMVYWNETLASSWFVATMFRWCFQLNMTWLVNSAAHKFGNRPYDKTM 259

Mouse   281 DPRQNALVSLGSMGEGFHNYHHAFPYDYSASEYR-WHINFTTFFIDCMAALGLAYDRKRVSKATV 344
            :|.|||.||..:.|||:||||||||:||..:|:. :.:|.||.|||..|.:|.|||.|.|:...:
  Fly   260 NPTQNAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFAKIGWAYDLKTVAPDVI 324

Mouse   345 LARIKRTGDGSHK 357
            ..|:.|||||||:
  Fly   325 QRRVLRTGDGSHE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scd3NP_077770.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 3/11 (27%)
Delta9-FADS-like 97..337 CDD:239582 143/240 (60%)
FA_desaturase 102..306 CDD:278890 125/203 (62%)
Histidine box-1. /evidence=ECO:0000305 120..125 4/4 (100%)
Histidine box-2. /evidence=ECO:0000305 157..161 2/3 (67%)
Histidine box-3. /evidence=ECO:0000305 298..302 3/3 (100%)
Desat2NP_650201.1 Delta9-FADS-like 76..317 CDD:239582 143/240 (60%)
FA_desaturase 81..284 CDD:278890 124/202 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845366
Domainoid 1 1.000 291 1.000 Domainoid score I1524
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2119
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 1 1.000 - - mtm8712
orthoMCL 1 0.900 - - OOG6_100468
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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