DRSC/TRiP Functional Genomics Resources

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Protein Alignment tncb and CG9500

DIOPT Version :9

Sequence 1:NP_001299845.1 Gene:tncb / 30037 ZFINID:ZDB-GENE-980526-104 Length:1811 Species:Danio rerio
Sequence 2:NP_609018.3 Gene:CG9500 / 33888 FlyBaseID:FBgn0031804 Length:292 Species:Drosophila melanogaster


Alignment Length:292 Identity:100/292 - (34%)
Similarity:143/292 - (48%) Gaps:40/292 - (13%)


- Green bases have known domain annotations that are detailed below.


Zfish  1529 LSFESADGVVKEVVLSPTA--------TFYSM-------SQLTASTEYTVKLQAIAGPKRSRVIS 1578
            |||.|.:.:..|...:.||        :.|.:       :|..||||...|            .|
  Fly    13 LSFYSTEAMDSESFQNDTAIRNKPELKSLYKLVLALLEENQSNASTENIQK------------SS 65

Zfish  1579 TVFLTIGVLYKHPKDCSQALLNGDTTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGK 1643
            :...|.|:..::|..|.    ......|:||:.:.|  .:|.||.||....|.||.|..||.|.|
  Fly    66 SDLNTTGLSGRYPSQCP----TYPPAHGIYTVQVLG--LKPFQVSCDAEIAGTGWTVMARRTSNK 124

Zfish  1644 VEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSFGQYELRVDLRD-KGESAYAQYDKFSI-SEPR 1706
            :.|||:|..|..|||.|:.:|::||..||.||....:||.:.|.| :|::.||.||:..| ||.:
  Fly   125 LNFFRSWAEYKNGFGQLDGDFFIGLDKLHAITKSQPHELYIHLEDFEGQTRYAHYDEIFIESENK 189

Zfish  1707 ARYKVHVGGYSGTAGDSMTYHHGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNIMGRY--G 1769
            ......:|.::|.|||||.::..:.|||:|.|||....|||..|.||:|:.||...|:.|.|  |
  Fly   190 FYAMTKLGEFTGDAGDSMIHNRNQNFSTFDRDNDGWHKNCAEEYVGAWWHLNCTYSNLFGIYVKG 254

Zfish  1770 DNSHS---KGVNWFHWKGHEHSVEFAEMKIRP 1798
            |....   ||:.|..|:...:|.:..:|.:||
  Fly   255 DEGQYFQWKGIVWHSWRTESYSYKVMQMMVRP 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncbNP_001299845.1 DnaJ <471..>544 CDD:333066
fn3 689..760 CDD:306538
fn3 778..858 CDD:306538
fn3 868..948 CDD:306538
FN3 958..1047 CDD:238020
fn3 1050..1128 CDD:306538
fn3 1140..1215 CDD:306538
fn3 1231..1303 CDD:306538
fn3 1323..1400 CDD:306538
fn3 1410..1482 CDD:306538
fn3 1498..1570 CDD:306538 14/55 (25%)
FReD 1589..1798 CDD:238040 81/215 (38%)
CG9500NP_609018.3 FReD 76..287 CDD:238040 83/217 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.710

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