DRSC/TRiP Functional Genomics Resources

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Protein Alignment tncb and CG31832

DIOPT Version :10

Sequence 1:NP_001299845.1 Gene:tncb / 30037 ZFINID:ZDB-GENE-980526-104 Length:1811 Species:Danio rerio
Sequence 2:NP_723894.2 Gene:CG31832 / 318970 FlyBaseID:FBgn0051832 Length:227 Species:Drosophila melanogaster


Alignment Length:228 Identity:80/228 - (35%)
Similarity:118/228 - (51%) Gaps:17/228 - (7%)


- Green bases have known domain annotations that are detailed below.


Zfish  1579 TVFLTIGVLYKHPKDCSQALLNGDTTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGK 1643
            |:...:|  ...|..|...     :.:|::.:.|  .|.:|.|| ....|....|||..||..|.
  Fly    12 TLLFEVG--QSSPHTCPSG-----SPNGIHQLML--PEEEPFQV-TQCKTTARDWIVIQRRLDGS 66

Zfish  1644 VEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSFGQYELRVDLR-DKGESAYAQYDKFSISEPRA 1707
            |.|.::|.:|..||||.|.||::||..|:.:|....:||.:.|: ..|.:.||.:|.|.:.....
  Fly    67 VNFNQSWFSYKDGFGDPNGEFFIGLQKLYLMTREQPHELFIQLKHGPGATVYAHFDDFQVDSETE 131

Zfish  1708 RYKV-HVGGYSGTAGDSMTYHHGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNIMGRY--- 1768
            .||: .||.||||||||:.||..:.|||:|.|||.:..|||..:.|.:|:.:|...::.|.|   
  Fly   132 LYKLERVGKYSGTAGDSLRYHINKRFSTFDRDNDESSKNCAAEHGGGWWFHSCLSSSLNGLYFRE 196

Zfish  1769 GDNSHSKGVNWFHWKGHEHSVEFAEMKIRPANF 1801
            |:.....|::|..||  ..|:.|.::.|||..|
  Fly   197 GETGMLNGIHWGRWK--FQSLTFVQIMIRPKYF 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncbNP_001299845.1 EGF_Tenascin 225..252 CDD:480934
EGF_Tenascin 256..283 CDD:480934
EGF_Tenascin 318..345 CDD:480934
EGF_Tenascin 380..407 CDD:480934
PRK10767 <471..>544 CDD:236757
EGF_Tenascin 535..562 CDD:480934
EGF_Tenascin 566..593 CDD:480934
EGF_Tenascin 597..623 CDD:480934
EGF_Tenascin 628..655 CDD:480934
EGF_Tenascin 659..686 CDD:480934
FN3 <689..>908 CDD:442628
FN3 <853..1296 CDD:442628
FN3 <1333..>1568 CDD:442628
FReD 1589..1798 CDD:238040 75/213 (35%)
CG31832NP_723894.2 FReD 28..225 CDD:238040 74/206 (36%)
Blue background indicates that the domain is not in the aligned region.

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