DRSC/TRiP Functional Genomics Resources

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Protein Alignment PACSIN1 and Cip4

DIOPT Version :9

Sequence 1:NP_001186512.1 Gene:PACSIN1 / 29993 HGNCID:8570 Length:444 Species:Homo sapiens
Sequence 2:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster


Alignment Length:580 Identity:101/580 - (17%)
Similarity:199/580 - (34%) Gaps:192/580 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    13 EETTDSFWEVGNYKRTVKRIDD--GHR---------------------LCNDLMNCVQERAKIEK 54
            ||..:.|..|..::..:|.:.|  |.|                     |..:...|:.:.|.:::
  Fly   123 EEEDNEFTSVQAFRNLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREERKKCLSDGATLQQ 187

Human    55 AYGQQLT--DWAKR-----WRQLIEKGPQYG------SLERA----WGAIMTEADKVSELHQEVK 102
            ....||:  |.|||     :|...:....|.      :|.||    :..:||...:.|:   :.|
  Fly   188 NLTTQLSSLDRAKRNYEKAYRDSEKAVDSYKRADMDLNLSRAEVERYKNVMTSKIQQSD---DAK 249

Human   103 NNLLNEDLEKVKNWQKDAYHKQIMG--------------GFKE---------------------- 131
            |...|: |:|..|.|:..|...:..              ||:|                      
  Fly   250 NEYANQ-LQKTNNLQQQHYSMLLPSVLNRLQELDEKRTRGFREFIVGAADVESSVAPIIARCMEG 313

Human   132 -------TKEAEDGFRKAQK-----------PWAKKMK-ELEAAKKAY-------HLACK----- 165
                   ..|.||.|:..::           |:....| :.::.:.::       ||..:     
  Fly   314 IVKAGESINEKEDTFKVIERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNSTSNHLTIRGTMSA 378

Human   166 --------------EEKLAMTREMNSKTEQSVTPEQ-QKKLQDKVDKCKQDV-QKTQEK----YE 210
                          ..|.::|.:...:....:.|.| :||||.|:.:..|:: |:|:.:    ..
  Fly   379 NKLKKRVGIFNIFGSNKNSLTADGQKEDFSDLPPNQRRKKLQAKIAELTQNIAQETKARDGLMKM 443

Human   211 KVLEDVGKTTPQYMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAI 275
            |::.:...:    :.|...|..|..:.|.|    |:::.:|:|::....|.:|.:.......||.
  Fly   444 KIVYEANSS----LGNPMTVEGQLNESEHK----LEKLKVDLKKYQGFLEKASQVPTATSSPQAS 500

Human   276 RGADAQEDLRWFRSTSGPGMPMNWPQFEEWNPDLPHTTTKKEKQ-------------------PK 321
            |. ..|...|..|.::|.....:....::  ||...:.::.:.:                   |:
  Fly   501 RN-QLQNGHRTSRHSNGSADDHHDDGDDQ--PDDAGSLSRSDSEDNVAQIQNGHNNNNNGSASPE 562

Human   322 KAEGVALTNATGAVESTSQAGDRGSVSSYDRGQPYATEWSDDESGNPFGGSETNGGANPFEDDSK 386
            ...|.:.|:..|:.:.::.....|..:.|:         ::.|:.||.|                
  Fly   563 SGLGTSHTSLPGSGQGSANENAIGEDTYYE---------TEVETLNPVG---------------- 602

Human   387 GVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSG----QLGLYPANYVE 442
              :.||||.::...:..:....|:||..:..:...||.|.|.::.    ..|..|.:|:|
  Fly   603 --KCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNSNGWDEGFVPTSYIE 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PACSIN1NP_001186512.1 F-BAR_PACSIN1 19..276 CDD:153364 67/383 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..194 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..386 10/95 (11%)
SH3_PACSIN1-2 388..443 CDD:212931 15/59 (25%)
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 36/199 (18%)
HR1_CIP4-like 412..488 CDD:212009 20/83 (24%)
SH3_CIP4-like 603..661 CDD:212844 15/58 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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