DRSC/TRiP Functional Genomics Resources

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Protein Alignment GZMH and snk

DIOPT Version :10

Sequence 1:NP_219491.1 Gene:GZMH / 2999 HGNCID:4710 Length:246 Species:Homo sapiens
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:260 Identity:77/260 - (29%)
Similarity:114/260 - (43%) Gaps:55/260 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    21 IIGGHEAKPHSRPYMAFVQFLQEKSRK------RCGGILVRKDFVLTAAHCQGSSIN----VTLG 75
            |:||...:....|:||.:.:.|....|      .|||.||.:.:|||||||..|...    |.||
  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250

Human    76 AHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKWTTAVRP--------LRLPSS 132
            |..:.|...|||.|.:...:.||.|....:.:||.||:|.|:.|::..|||        |::|:.
  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTV 315

Human   133 KAQVKPGQLCSVAGWGYVS-MSTLATTLQEVLLTVQKDCQCERLF-----------HGNYSRATE 185
            .|          ||||... :...:..|::|.|.|.....|::::           .|.:     
  Fly   316 VA----------AGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQF----- 365

Human   186 ICVGDPKKTQTGFKGDSGGPL-------VCKDVAQGILSYGNKKGTP--PGVYIKVSHFLPWIKR 241
             |.|.....:...:||||||:       .|.....||.|:|.....|  ||||.::..:|.||::
  Fly   366 -CAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429

Human   242  241
              Fly   430  429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GZMHNP_219491.1 Tryp_SPc 21..242 CDD:238113 77/260 (30%)
Mediates the preference for acidic residues at the P3' and P4' sites 46..48 1/7 (14%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 77/260 (30%)
Blue background indicates that the domain is not in the aligned region.

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