Protein Alignment RHOD and rho4

DIOPT Version :9

• Sequence 1: NP_055393.1
• Gene: RHOD / 29984
• HGNCID: 670
• Length: 210
• Species: Homo sapiens
• Sequence 2: NP_001018257.1
• Gene: rho4 / 3361476
• PomBaseID: SPAC16A10.04
• Length: 203
• Species: Schizosaccharomyces pombe
• Alignment Length: 211
• Identity: 98/211 - (46%)
• Similarity: 141/211 - (66%)
• Gaps: 11/211 - (5%)

Human     1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV--KGK 63
            |:|.:.:|.::.   .|.|:|:|||||||||.||:||:.|.|||.|.|||||.|:.::..  ..|
pombe     1 MSAFKKSGSKSE---TSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSK 62

Human    64 PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128
            .:.|.:||||||::|||||||.||:::|:||||.:..|.|.:|:..:|||||.|||.:.||::||
pombe    63 VIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVG 127

Human   129 CKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            .|.|||||::....||..||.||||.:.|.:|.|:.| .|:||||:.:..|:.|||.|..:.:.
pombe   128 LKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNA-PYVECSAKENTGVNEVFQLAVGLTIK- 190

Human   194 RGRNFWRRITQGFCVV 209
              ::|  ..::..||:
pombe   191 --KSF--SFSKKSCVI 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RHOD	NP_055393.1	Rho4_like	16..210	CDD:206704	95/196 (48%)
rho4	NP_001018257.1	Rho4_like	12..189	CDD:206704	92/180 (51%)
		RHO	17..185	CDD:197554	89/168 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24072
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.910