DRSC/TRiP Functional Genomics Resources

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Protein Alignment POMT2 and PMT2

DIOPT Version :10

Sequence 1:XP_047287268.1 Gene:POMT2 / 29954 HGNCID:19743 Length:826 Species:Homo sapiens
Sequence 2:NP_009379.2 Gene:PMT2 / 851210 SGDID:S000000021 Length:759 Species:Saccharomyces cerevisiae


Alignment Length:839 Identity:277/839 - (33%)
Similarity:410/839 - (48%) Gaps:130/839 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    11 ESELRPRRG---RCGPQAARAAGRDVAAEAVARSPKRPAWGSR--RFEAVGWWALLALVTLLSFA 70
            |:.||.|..   ....:.:.|..||    |...|.::||..|.  |.|:|   .:..:.|.|:..
Yeast    20 ENTLRQRESSSISVSEELSSADERD----AEDFSKEKPAAQSSLLRLESV---VMPVIFTALALF 77

Human    71 TRFHRLDEPPHICWDETHFGKMGSYYINRTFFFDVHPPLGKMLIGLAGYLSGYDGTFLFQKPGDK 135
            ||.:::....|:.|||.||||.||||:...|:.||||||||||:||:|||:||:|::.|.. |:.
Yeast    78 TRMYKIGINNHVVWDEAHFGKFGSYYLRHEFYHDVHPPLGKMLVGLSGYLAGYNGSWDFPS-GEI 141

Human   136 Y-EHHSYMGMRGFCAFLGSWLVPFAYLTVLDLSKSLSAALLTAALLTFDTGCLTLSQYILLDPIL 199
            | ::..|:.||.|.|...:..||.||.|...:..||....|...|:.|:....||.::||||.:|
Yeast   142 YPDYLDYVKMRLFNASFSALCVPLAYFTAKAIGFSLPTVWLMTVLVLFENSYSTLGRFILLDSML 206

Human   200 MFFIMAAMLSMVKYNSCADRPFSAPWWFWLSLTGVSLAGALGVKFVGLFIILQVGLNTIADLWYL 264
            :||.:|:..|.|.:::...:|||..||.||.:||:||...:.||.||||||..||:.|:.|||..
Yeast   207 LFFTVASFFSFVMFHNQRSKPFSRKWWKWLLITGISLGCTISVKMVGLFIITMVGIYTVIDLWTF 271

Human   265 FGDLSLSLVTVGKHLTARVLCLIVLPLALYTATFAVHFMVLSKSGPGDGFFSSAFQARLSGNNLH 329
            ..|.|:|..|...|..||:..||::|..::...|.:||.:||.||.||....|.|||||.|:::.
Yeast   272 LADKSMSWKTYINHWLARIFGLIIVPFCIFLLCFKIHFDLLSHSGTGDANMPSLFQARLVGSDVG 336

Human   330 NASIPEHLAYG-SVITVKNLRMAIGYLHSHRHLYPEGIGARQQQVTTYLHKDYNNLWIIKKHNTN 393
            ..  |..:|.| ||:::||..:....||||...||:  |:.|||||.|.:||.||.|...:....
Yeast   337 QG--PRDIALGSSVVSIKNQALGGSLLHSHIQTYPD--GSNQQQVTCYGYKDANNEWFFNRERGL 397

Human   394 SDPLDPSFPVEFVRHGDIIRLEHKECPLKKIWRWEQKETSRNLHSHYHEAPMTRKHYQVTGYGIN 458
            ....:....:|:::.|...||.|             |.|.||||:|...||:::..::|:|||.|
Yeast   398 PSWSENETDIEYLKPGTSYRLVH-------------KSTGRNLHTHPVAAPVSKTQWEVSGYGDN 449

Human   459 GTGDSNDFWRIEVVNRKFGN----RIKVLRSRIRFIHLVTGCVLGSSGKVLPKWGWEQLEVTC-- 517
            ..||:.|.|.||::::: |:    ::..|.:..|..:|..||.|..:|..||:||:.|.||.|  
Yeast   450 VVGDNKDNWVIEIMDQR-GDEDPEKLHTLTTSFRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMK 513

Human   518 TPYLKETLNSIWNVEDHINPKLPNISLDVLQP--SFPEILLESHMVMIRGNSGLKPKDNEF---T 577
            .|: |....:.||:|.|.|.:||....|...|  :|.:..:..::.|:..|:.|.|..::|   .
Yeast   514 NPF-KRDKRTWWNIETHENERLPPRPEDFQYPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLA 577

Human   578 SKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWLNLLSIALYLLSGSIIAVAMQRGARLPAEV 642
            |..|.||....|||..|..|.:.:.:|||.|...|.:.:::..::.:..|:.:..||        
Yeast   578 SSAWQWPTLNVGLRLCGWGDDNPKYFLLGTPASTWASSVAVLAFMATVVILLIRWQR-------- 634

Human   643 AGQVLWALPPLTWRQQGTCTPGEGRLPADGPSFAFTTPHLPLSFAFERKPRNHEIKKLAPGHTAR 707
                                                      .:...|.|.|.            
Yeast   635 ------------------------------------------QYVDLRNPSNW------------ 645

Human   708 LSQVLLRGGGQVLLGWTLHYFPFFLMGRVLYFHHYFPAMLFSSMLTGILWDTLLRLCAWGLASWP 772
              .|.|.||...||.|.|||.||.:|.||.|.|||.||:.|:.::....:|.       ||..|.
Yeast   646 --NVFLMGGFYPLLAWGLHYMPFVIMSRVTYVHHYLPALYFALIILAYCFDA-------GLQKWS 701

Human   773 ------LARGIHVAGILSLLLGTAYSFYLFHPLAYGMVGPLAQDPQSPMAGLRWLDSWD 825
                  :.|.:..||.::|::|   .|:.|.|:::||.|     |.|....|.|..:||
Yeast   702 RSKCGRIMRFVLYAGFMALVIG---CFWYFSPISFGMEG-----PSSNFRYLNWFSTWD 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POMT2XP_047287268.1 PMT 62..306 CDD:396786 103/244 (42%)
beta-trefoil_MIR_POMT2 337..536 CDD:467753 71/205 (35%)
PMT_4TMC 555..822 CDD:465056 66/275 (24%)
PMT2NP_009379.2 PMT 69..313 CDD:396786 103/244 (42%)
beta-trefoil_MIR_PMT2-like 339..531 CDD:467755 72/208 (35%)
PMT_4TMC 550..749 CDD:465056 66/277 (24%)

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