DRSC/TRiP Functional Genomics Resources

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Protein Alignment POMT2 and tw

DIOPT Version :10

Sequence 1:XP_047287268.1 Gene:POMT2 / 29954 HGNCID:19743 Length:826 Species:Homo sapiens
Sequence 2:NP_569858.1 Gene:tw / 31024 FlyBaseID:FBgn0086368 Length:765 Species:Drosophila melanogaster


Alignment Length:831 Identity:404/831 - (48%)
Similarity:523/831 - (62%) Gaps:97/831 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    16 PRRGRCGPQAARAAGRDVAAEAVARSP---KRPAWGSRRFEAVGWWALLALVTLLSFATRFHRLD 77
            ||||         :.:|||..|...:|   |...|        .||.|||.|.|::|||||:::.
  Fly    12 PRRG---------SVKDVAQNAPRTAPTSSKEANW--------NWWLLLATVFLVTFATRFYKVT 59

Human    78 EPPHICWDETHFGKMGSYYINRTFFFDVHPPLGKMLIGLAGYLSGYDGTFLFQKPGDKYEHHSYM 142
            ||.||||||||||||||:|||||||||||||||||||||:|||:||:|||.|:||||||....|.
  Fly    60 EPDHICWDETHFGKMGSWYINRTFFFDVHPPLGKMLIGLSGYLTGYNGTFPFEKPGDKYNETRYQ 124

Human   143 GMRGFCAFLGSWLVPFAYLTVLDLSKSLSAALLTAALLTFDTGCLTLSQYILLDPILMFFIMAAM 207
            |||.||..||:.::|..:.||.||::|..||||.||.|.||.|.|||:|||||||||:||:||::
  Fly   125 GMRYFCTTLGALIMPMGFDTVYDLTRSHEAALLAAAYLIFDVGLLTLNQYILLDPILLFFMMASV 189

Human   208 LSMVKY--NSCADRPFSAPWWFWLSLTGVSLAGALGVKFVGLFIILQVGLNTIADLWYLFGDLSL 270
            ..|||.  ::.:...:...||.||.|||..|:..:.|||||||::|.|||:|..:||.:.|||..
  Fly   190 WGMVKVSKSTASGGSYGLRWWLWLFLTGTMLSCTISVKFVGLFVVLLVGLHTATELWLILGDLGQ 254

Human   271 SLVTVGKHLTARVLCLIVLPLALYTATFAVHFMVLSKSGPGDGFFSSAFQARLSGNNLHNASIPE 335
            .::...|.|..|.:.|||.|:.||...|.:|..||::||.||||:|||||:||.||:|:|||:|.
  Fly   255 PILETVKQLACRAITLIVWPVLLYILFFYIHLSVLNRSGNGDGFYSSAFQSRLIGNSLYNASMPR 319

Human   336 HLAYGSVITVKNLRMAIGYLHSHRHLYPEGIGARQQQVTTYLHKDYNNLWIIKKHNTNSDPLDPS 400
            .:||||::|:||.:...||||||.||||:|.||||||||||.|||.||.|:|:.||   .|..|.
  Fly   320 DVAYGSLVTIKNHKTGGGYLHSHHHLYPKGSGARQQQVTTYTHKDENNKWLIRPHN---KPGPPK 381

Human   401 FPVEFVRHGDIIRLEHKECPLKKIWRWEQKETSRNLHSHYHEAPMTRKHYQVTGYGINGTGDSND 465
            ..|:.:||||::||.|             ..|.||||||...||||:||.||||||..|.||:||
  Fly   382 GKVQILRHGDLVRLTH-------------MATRRNLHSHNEPAPMTKKHLQVTGYGELGLGDAND 433

Human   466 FWRIEVVNRKFGNRIKVLRSRIRFIHLVTGCVLGSSGKVLPKWGWEQLEVTCTPYLKETLNSIWN 530
            .||:.:|..|....:..:.||::||||:..|.|.||||.|||||:||.||:|.|.:::. ||.||
  Fly   434 VWRVLIVGGKVNETVHTVTSRLKFIHLLQNCALTSSGKQLPKWGFEQQEVSCNPNVRDK-NSQWN 497

Human   531 VEDHINPKLPNISLDVLQPSFPEILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGV 595
            |||:.:..:|::|..|..|.|....||||.||::||:|||||:.|.||:||.|||||:|..||| 
  Fly   498 VEDNEHKLMPSVSFSVYAPGFFARFLESHAVMLQGNAGLKPKEGEVTSRPWQWPINYRGQFFSG- 561

Human   596 NDTDFRVYLLGNPVVWWLNLLSIALYLLSGSIIAVAMQRGARLPAEVAGQVLWALPPLTWRQQ-- 658
              :.:|:||||||::||.||:.:||::......||..||.|.. |..|.|....:|......|  
  Fly   562 --SSYRIYLLGNPLIWWSNLVFLALFVTVFLCNAVVQQRRAGF-ARSAAQNQAQVPDSETVAQDE 623

Human   659 ----------GTCTPGEGRLPADGPSFAFTTPHLPLSFAFERKPRNHEIKKLAPGHTARLSQVLL 713
                      ..|||.:..:|...||.:...|:                    |..:       |
  Fly   624 ESEHSTTDICSCCTPAKEIVPKAVPSGSPEAPN--------------------PAQS-------L 661

Human   714 RGGGQVLLGWTLHYFPFFLMGRVLYFHHYFPAMLFSSMLTGILWDTLLRLCAWGLASWPLARGIH 778
            |....:.|||.|||.||:.|||||||||||||::|:|:|||::::.:||:    |..|     ||
  Fly   662 RAAAWLFLGWMLHYLPFWAMGRVLYFHHYFPALIFNSLLTGVMYNYILRV----LPKW-----IH 717

Human   779 --VAG-ILSLLLGTAYSFYLFHPLAYGMVGPLAQDPQSPMAGLRWLDSWDF 826
              :.| :||:|:   |||..|.||||||.||||.:|.|.|..|:||.:|:|
  Fly   718 HVILGLVLSILV---YSFAAFSPLAYGMSGPLANEPNSTMYNLKWLSTWEF 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POMT2XP_047287268.1 PMT 62..306 CDD:396786 140/245 (57%)
beta-trefoil_MIR_POMT2 337..536 CDD:467753 105/198 (53%)
PMT_4TMC 555..822 CDD:465056 115/281 (41%)
twNP_569858.1 PMT 44..290 CDD:396786 140/245 (57%)
beta-trefoil_MIR_POMT2 321..503 CDD:467753 105/198 (53%)
PMT_4TMC 520..761 CDD:465056 115/283 (41%)

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