Sequence 1: | NP_062197.1 | Gene: | Myo1a / 299509 | RGDID: | 3135 | Length: | 1043 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
Alignment Length: | 1116 | Identity: | 340/1116 - (30%) |
---|---|---|---|
Similarity: | 533/1116 - (47%) | Gaps: | 193/1116 - (17%) |
- Green bases have known domain annotations that are detailed below.
Rat 10 VEDLILLEPLDEESLIKNLQLRYEKKEIYTYIGNVVISMNPYQQLPIYGPEFIAKYRDYTFYELK 74
Rat 75 PHIYALANVAYQSLKDRDRDQCILITGESGAGKTEASKLVMSYVAAVCGKGEQVN-------SVK 132
Rat 133 EQLLQSNPVLEAFGNAKTIRNDNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRVVKQLKGERN 197
Rat 198 FHIFYQLLAGADTQLLKALKLEEDARGYAYLN-GEVSRVNGMDDASNFRAVQNAMAVIGFSEEEI 261
Rat 262 RQVLEVTALVLKLGNVKLADEFQANGLPASGVCDGKGIQE---IGEMMGLNSAELEKALCSRTME 323
Rat 324 TGKEKVVTVLNVIQAQYARDALAKNIYSRLFDWIVNRINESIKVGTGEKRK-VMGVLDIYGFEIL 387
Rat 388 EDNSFEQFVINYCNEKLQQVFIELTLKEEQEEYKREGIPWTKVEYFDNGIIC-DLIEHSQRGILA 451
Rat 452 MLDEECLRPGVVSDTTFLAKL-NQLFSKHSHYES----KVTQNAQRQYDRTMGLSCFRICHYAGK 511
Rat 512 VTYNVTSFIDKNNDLLFRDLSQTMWKAQHPLLHSLFPE-----GNPKEASLKRP------PTAGT 565
Rat 566 QFKNSVAILMKNLYSKNPNYIRCIKPNDQQQQGRFTSELVMVQARYLGLLENVRVRRAGYAFRQA 630
Rat 631 YKPFLERYRLLSRSTWPR-WNG--EDREGVEKVLGSLILSSEELAYGRTKIFIRSPKTLFYLEEQ 692
Rat 693 RRLRLQQLATLIQKVYRGWRCRTHYQQMRKSQILISAWFRGNKQKKHYGKIRSSVLLIQAFVRGW 757
Rat 758 KARKNYRKYFRSGAAITLANFIYQSITQKF--LLNLKKNLPSTKVLDNTWPAAPYRCFNTANQEL 820
Rat 821 QHLFYQWKCK----------KYRDQLSPKQVQTLREKLCASELFKGKKASYLQSVPVPFRGDYVG 875
Rat 876 LQGNPKL---------------QRLKGREEGPVLVADTVKKVNR---GNGKTSSRILL------- 915
Rat 916 --LTKGHVI--LTDAKKSQAQIVIKL-EDVAGVSVTSLEDGLFSLHLSEMSSAASKGDILLISDH 975
Rat 976 LVELLTKMYQA---VLDATQRQLPVTVTEKFSVRFKEGSVAVKVTQGPQGSGNR-----KLTCKK 1032
Rat 1033 KGSSSMEVTVR 1043 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myo1a | NP_062197.1 | MYSc_Myo1 | 22..681 | CDD:276829 | 254/690 (37%) |
IQ | 742..764 | CDD:197470 | 2/21 (10%) | ||
Myosin_TH1 | 847..1042 | CDD:399188 | 49/232 (21%) | ||
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | |
MYSc | 81..777 | CDD:214580 | 261/715 (37%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 254/690 (37%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 59/300 (20%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | |||
ATP-synt_B | <1671..1771 | CDD:304375 | |||
TMPIT | 1739..>1825 | CDD:285135 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |