Sequence 1: | NP_037472.2 | Gene: | PCDHB1 / 29930 | HGNCID: | 8680 | Length: | 818 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_731649.2 | Gene: | Cad87A / 41441 | FlyBaseID: | FBgn0037963 | Length: | 1975 | Species: | Drosophila melanogaster |
Alignment Length: | 788 | Identity: | 186/788 - (23%) |
---|---|---|---|
Similarity: | 302/788 - (38%) | Gaps: | 200/788 - (25%) |
- Green bases have known domain annotations that are detailed below.
Human 68 SEGNKMHFRLHRKTGDLFVKEK--LDRESLCGKADPCVLHFEVVLVEPLQSFRA----EVRVFDI 126
Human 127 NDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHG--P 189
Human 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQVSEN 254
Human 255 SPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKT-------------FQIDPQNGEVRLRGP 306
Human 307 LDFEAIETYDIDIQATD--------GGGLSAHSKVLVEVVDVNDNPPEVMVS-SVSSP-----LP 357
Human 358 EDSPPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITI 422
Human 423 VAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQI 487
Human 488 TYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATD--GGFLSLSSQVTVRV 550
Human 551 VVLDDNDNRPM------------------------------------------------------ 561
Human 562 ----ILYPLQ--------------------NGTLPCND----------------LVPRSAEA--- 583
Human 584 --------GYLVTKVVAVDGDSGQNSWLSYHL----LKATDLGLFSVQRQNGEIHTLRQISERDP 636
Human 637 MMQKLIILVQDHGQPALSTTVSLNILLVDG---------FSEPY----------------LQFQD 676
Human 677 PTKHSRKV 684 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PCDHB1 | NP_037472.2 | Cadherin_2 | 30..110 | CDD:311943 | 12/43 (28%) |
Cadherin_repeat | 140..238 | CDD:206637 | 25/99 (25%) | ||
Cadherin_repeat | 246..343 | CDD:206637 | 30/117 (26%) | ||
Cadherin_repeat | 356..448 | CDD:206637 | 25/91 (27%) | ||
Cadherin_repeat | 456..558 | CDD:206637 | 32/103 (31%) | ||
Cadherin_repeat | 577..665 | CDD:206637 | 23/102 (23%) | ||
Cadherin_C_2 | 688..772 | CDD:318652 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 789..818 | ||||
Cad87A | NP_731649.2 | Cadherin_repeat | 33..128 | CDD:206637 | |
Cadherin_repeat | 136..240 | CDD:206637 | |||
Cadherin_repeat | 248..353 | CDD:206637 | |||
Cadherin_repeat | 362..468 | CDD:206637 | |||
Cadherin_repeat | 476..>533 | CDD:206637 | |||
E_set | <627..667 | CDD:298831 | |||
CA | 692..772 | CDD:214520 | 18/68 (26%) | ||
Cadherin_repeat | 778..873 | CDD:206637 | 24/101 (24%) | ||
Cadherin_repeat | 882..994 | CDD:206637 | 30/117 (26%) | ||
Cadherin_repeat | 1015..1099 | CDD:206637 | 25/89 (28%) | ||
Cadherin_repeat | 1108..1207 | CDD:206637 | 32/102 (31%) | ||
Cadherin_repeat | 1215..1314 | CDD:206637 | 6/98 (6%) | ||
Cadherin_repeat | 1327..1427 | CDD:206637 | 23/99 (23%) | ||
Cadherin_repeat | 1437..1549 | CDD:206637 | 6/31 (19%) | ||
Cadherin_repeat | 1557..1662 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |