Sequence 1: | NP_037425.1 | Gene: | TRA2A / 29896 | HGNCID: | 16645 | Length: | 282 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_733041.2 | Gene: | Saf-B / 42958 | FlyBaseID: | FBgn0039229 | Length: | 928 | Species: | Drosophila melanogaster |
Alignment Length: | 312 | Identity: | 74/312 - (23%) |
---|---|---|---|
Similarity: | 118/312 - (37%) | Gaps: | 70/312 - (22%) |
- Green bases have known domain annotations that are detailed below.
Human 3 DVEENNFEGRESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHRR 67
Human 68 YTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTC---LGVFGLSLY 129
Human 130 TTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
Human 195 S--------ITKRAHTPTPGIY--------MGRPTHSGGGGGGG------GGGGGG-----GGGR 232
Human 233 RRDSYYDRGYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSY----SPR 280 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TRA2A | NP_037425.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..118 | 22/114 (19%) | |
RRM_TRA2 | 118..197 | CDD:409798 | 27/89 (30%) | ||
Linker | 198..225 | 8/40 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 201..245 | 14/62 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 260..282 | 7/25 (28%) | |||
Saf-B | NP_733041.2 | SAP | 11..42 | CDD:280251 | |
RRM | 205..>394 | CDD:223796 | 49/200 (25%) | ||
RRM_SAFB_like | 313..386 | CDD:240863 | 25/72 (35%) | ||
SWIRM-assoc_1 | <588..618 | CDD:293104 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1765 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |