Protein Alignment TRA2A and cocoon

DIOPT Version :10

• Sequence 1: NP_037425.1
• Gene: TRA2A / 29896
• HGNCID: 16645
• Length: 282
• Species: Homo sapiens
• Sequence 2: NP_648764.1
• Gene: cocoon / 39665
• FlyBaseID: FBgn0036496
• Length: 318
• Species: Drosophila melanogaster
• Alignment Length: 149
• Identity: 45/149 - (30%)
• Similarity: 64/149 - (42%)
• Gaps: 17/149 - (11%)

Human    80 RRSRSRSYTPEYRRRRSRSH----SPMSNRRRHTGSRANPDPNT--------C--LGVFGLSLYT 130
            |.:..|.|:|.........|    .|..|:|:...:..|....|        |  |.|.|||..|
  Fly    54 RSNEGRLYSPSEETGWGEYHYFCVFPKKNKRQSEDNLENSTAKTKRTEAHLRCFDLIVLGLSYNT 118

Human   131 TERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
            ||:||||.|..||.:....:..|.|:|.|:||.||.|...|.....:.:.:  .:|||...|...
  Fly   119 TEQDLREYFETYGDVVKAEIKKDTRSGHSKGFGFVRFGSYDVQMHVLSKRH--SIDGRWCEVKVP 181

Human   196 ITKRAHTPTPG-IYMGRPT 213
            .::......|| :::||.|
  Fly   182 ASRGMGNQEPGKVFVGRCT 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TRA2A	NP_037425.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..118		9/41 (22%)
		RRM_TRA2	118..197	CDD:409798	31/88 (35%)
		Linker	198..225		5/17 (29%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	201..245		5/14 (36%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	260..282
cocoon	NP_648764.1	TDP43_N	3..78	CDD:465833	5/23 (22%)
		RRM1_TDP43	108..181	CDD:409760	29/74 (39%)
		RRM2_TDP43	193..262	CDD:409761	3/8 (38%)