DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNOT7 and caf1

DIOPT Version :10

Sequence 1:NP_001309022.1 Gene:CNOT7 / 29883 HGNCID:14101 Length:307 Species:Homo sapiens
Sequence 2:NP_588385.2 Gene:caf1 / 2539041 PomBaseID:SPCC18.06C Length:335 Species:Schizosaccharomyces pombe


Alignment Length:292 Identity:152/292 - (52%)
Similarity:193/292 - (66%) Gaps:27/292 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     2 PAATVD--HSQ--RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQY 62
            ||..||  .||  .|.:||:.||.:||..|..:|.:|..|:||||||||||||:|.|:|:.||.|
pombe    11 PALGVDGISSQISPIRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDYHY 75

Human    63 QLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTLGVVAHACNPSTLGGRGGRITRE 127
            |.||.|||.|||||:||...:|:|..|....||||||.|||                      ::
pombe    76 QTLRANVDSLKIIQIGLALSDEEGNAPVEACTWQFNFTFNL----------------------QD 118

Human   128 DMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILT 192
            ||||.:||||||.|||.||||:|.|||...|||||:.||:||.|.|.|::|||||||.||:|.:|
pombe   119 DMYAPESIELLTKSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMT 183

Human   193 NSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTG 257
            ...||.|..:|::||.::||..||:||:|||..|...|||::|:.|::.|||||||||||:|||.
pombe   184 QIPLPAEYEEFYKILCIYFPKNYDIKYIMKSVLNNSKGLQDIADDLQIHRIGPQHQAGSDALLTA 248

Human   258 MAFFKMREMFFEDHIDDAKYCGHLYGLGSGSS 289
            ..||::|..:|:..| |::....||||||..|
pombe   249 RIFFEIRSRYFDGSI-DSRMLNQLYGLGSTGS 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNOT7NP_001309022.1 CAF1 1..301 CDD:474062 152/292 (52%)
caf1NP_588385.2 POP2 4..314 CDD:227553 152/292 (52%)

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