DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cabp5 and Eip63F-1

DIOPT Version :9

Sequence 1:NP_038905.1 Gene:Cabp5 / 29865 MGIID:1352746 Length:173 Species:Mus musculus
Sequence 2:NP_524902.2 Gene:Eip63F-1 / 47878 FlyBaseID:FBgn0004910 Length:193 Species:Drosophila melanogaster


Alignment Length:194 Identity:45/194 - (23%)
Similarity:98/194 - (50%) Gaps:42/194 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 MGPACIFLRKGIAEKQRERPLGQDELDELREAFLEFDKDQDGFISYKDLGNLMRTMGYMPTEMEL 69
            :|.|  .|.|...:..:::|..:.|:.:||.||...|:::||.::..:|..:::.:|...::..:
  Fly    14 LGTA--LLGKRATKSVKKKPFTEVEIKDLRTAFDLLDRNRDGRVTANELQFMLKNLGINVSDELI 76

Mouse    70 TELGQQIRMNLGGRVDFEDFVELMTPKLLAETAGMIG-VQEMRD--------------------- 112
            .:|.::...:..|.::..:|::            .:| :|.:||                     
  Fly    77 HDLIREASHSGNGLINEAEFLQ------------WVGRIQALRDEQHSHEDSKDSKPVDEADDVT 129

Mouse   113 -----AFKEFDANGDGEITLAELQQAMQRLLGEKLTPREIAEVVQEADINGDGTVDFEEFVKMM 171
                 ||:.||.:|:|.||..|||.||: ::||.|..:::.:::..||::.||.:::|||.:::
  Fly   130 EDLIAAFRVFDRDGNGFITRDELQTAME-MIGEPLNEQQLEQLLVIADLDQDGRINYEEFTRLL 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cabp5NP_038905.1 PTZ00184 25..171 CDD:185504 40/172 (23%)
EFh 32..94 CDD:238008 12/61 (20%)
EFh 109..172 CDD:238008 25/89 (28%)
Eip63F-1NP_524902.2 PTZ00184 33..193 CDD:185504 40/173 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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