DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dpf1 and d4

DIOPT Version :9

Sequence 1:XP_006540095.1 Gene:Dpf1 / 29861 MGIID:1352748 Length:437 Species:Mus musculus
Sequence 2:NP_610163.1 Gene:d4 / 35485 FlyBaseID:FBgn0033015 Length:497 Species:Drosophila melanogaster


Alignment Length:511 Identity:167/511 - (32%)
Similarity:221/511 - (43%) Gaps:172/511 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse    44 IQNPLKSLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPG 108
            |||.|..  ::.|:|.:|:..::|.|||.||.||:||||.||||||.:|.::|:|..|.|||..|
  Fly    21 IQNFLND--KEKYKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHG 83

Mouse   109 QIYTYPARCWRKKRRLNILE-DPRLRPCEYKIDCEAPLKKEG---------------GLPEGPVL 157
            ||||||:..|||.:|..:|. :...|..:|:   |..|:...               .:|:.|.|
  Fly    84 QIYTYPSSRWRKPKRQYLLNPNQSFRAYQYR---EHNLQHSHHQTHQHHHHIPSSGVAVPQNPHL 145

Mouse   158 -EALLCAETGEKKVELKEEETIMDCQKQQLLEFPHDLEV--------EDLEEDI----------- 202
             |:...|.|....:....:....|.......|:.|| |:        ::.|:|.           
  Fly   146 AESAAIAATDGNSMGASGDNDSKDSHANVEKEWFHD-EMDTSHFHHGDEFEDDFDSDNDFDESYT 209

Mouse   203 ----------PRRKNR------ARGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPG-- 249
                      |||.|.      .||:..  ||.|::.......||             |.|.|  
  Fly   210 SRGKRKKCSRPRRTNANVEGTPKRGRKG--GGNRRKNAVEGESDR-------------KRRAGGN 259

Mouse   250 ---------------------------LSYHYTHTHLAEEEGEEHTERHALPFHRKN-------- 279
                                       ...:.:|::.|.          .:|.:..|        
  Fly   260 SANTSAAAAAAAAAVAHAACTAAAVASTGLYASHSNSAS----------PIPINDDNSQSGLILP 314

Mouse   280 -NHKQFYKELA--------WVPEAQ--------------RKHTAKKAPDGTVI------------ 309
             |....|.:.:        .:|.|.              ..|..:...:.||.            
  Fly   315 TNISSSYDKTSSDAGASNDSIPLATMVAINAGLTTSNVCNAHPVQTGTNQTVFATGNKVKQRVER 379

Mouse   310 ----PNGYCDFCLGG---SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKS 367
                |:.|||||||.   :|||..||:|:||:||||||||||||||.||..:|:.|||||||||.
  Fly   380 DIAQPSPYCDFCLGDQRENKKTNMPEELVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKY 444

Mouse   368 CSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 423
            ||:||||:||          |||||||||||||||||||||:..||||||||.||:
  Fly   445 CSICGTSDND----------DQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCM 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dpf1XP_006540095.1 Requiem_N 52..123 CDD:372894 38/70 (54%)
SFP1 <225..259 CDD:227516 6/62 (10%)
PHD1_DPF1 309..366 CDD:277160 40/75 (53%)
PHD2_d4 367..422 CDD:277005 37/54 (69%)
d4NP_610163.1 Requiem_N 30..98 CDD:290758 38/67 (57%)
PHD1_d4 387..442 CDD:277091 38/54 (70%)
PHD2_d4 444..489 CDD:277005 37/54 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846911
Domainoid 1 1.000 101 1.000 Domainoid score I6910
eggNOG 1 0.900 - - E1_KOG1244
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 299 1.000 Inparanoid score I2682
Isobase 1 0.950 - 0 Normalized mean entropy S2732
OMA 1 1.010 - - QHG49768
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001297
OrthoInspector 1 1.000 - - otm42647
orthoMCL 1 0.900 - - OOG6_105541
Panther 1 1.100 - - O PTHR10615
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5121
SonicParanoid 1 1.000 - - X895
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.830

Return to query results.
Submit another query.