DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndrg3 and MESK2

DIOPT Version :9

Sequence 1:NP_001342320.1 Gene:Ndrg3 / 29812 MGIID:1352499 Length:388 Species:Mus musculus
Sequence 2:NP_995914.1 Gene:MESK2 / 37451 FlyBaseID:FBgn0043070 Length:485 Species:Drosophila melanogaster


Alignment Length:385 Identity:141/385 - (36%)
Similarity:205/385 - (53%) Gaps:37/385 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MDELQDVQLTEIKPLLNDKNGTRNFQDFDCQEHDIETPHGMVHVTIRGLPKGNRPVILTYHDIGL 65
            :|.:.|::|..::  |...|...:..: .|::..:.|..|.|||.|:|  ...:|.|:||||:||
  Fly    20 VDPMDDIELRSVQ--LQFPNARGSILE-ACEQRRVPTDKGDVHVAIQG--DTAKPAIITYHDLGL 79

Mouse    66 NHKSCFNTFFNFEDMQEITQHFAVCHVDAPGQQEAAPSFPTGYQYPTMDELAEMLPPVLTHLSMK 130
            |:.:.|..||||..|:.:.::|.|.||.||||:|.||:.|..|.|||||:||..|..||:|..:|
  Fly    80 NYATSFAGFFNFPVMRGLLENFCVYHVTAPGQEEGAPTLPEDYVYPTMDDLAAQLLFVLSHFGLK 144

Mouse   131 SIIGIGVGAGAYILSRFALNHPELVEGLVLINIDPCAKGWIDWAAS-------KLSGFTTNIVDI 188
            |:||.||||||.||:|||..||:.|..|.|||......|||:|...       :..|.|..::|.
  Fly   145 SVIGFGVGAGANILARFAHAHPDKVGALCLINCVSTQSGWIEWGYQSFNARFLRTKGMTQGVIDY 209

Mouse   189 ILAHHFGQEELQANLDLIQTYRLHIAQDINQENLQLFLGSYNGRRDLEIER--PILGQNDNRLKT 251
            ::.||||:...:.|.||:|.|:.|..:.:|..||.:.:.:|..|.||.:.|  |....::....|
  Fly   210 LMWHHFGRNPEERNHDLVQMYKQHFERGVNPTNLAMLINAYIHRNDLHLARTPPGTPGSETAATT 274

Mouse   252 LKCSTLLVVGDNSPAVEAVVECNSRLDPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMGYI 316
            ||...:.:.|..||.|:..|..|.||||.|::.:|::|| .|....||.||.|||:.||||.|| 
  Fly   275 LKMPVINITGSLSPHVDDTVTFNGRLDPTNSSWMKISDC-ALVLEEQPAKLAEAFRLFLQGEGY- 337

Mouse   317 PYVQLSHLSSESVPSASMTRLARSRTHSTSSSIGSGESPFSRSVTSNQSDGTQESCESPD 376
                   .:..|.|:              ||..|:....:|....:|..:..|::.|..|
  Fly   338 -------ATPLSTPA--------------SSPCGTKYHTYSSIFFANFREQQQQAMEERD 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ndrg3NP_001342320.1 Ndr 32..317 CDD:397285 125/293 (43%)
MESK2NP_995914.1 Abhydrolase 51..337 CDD:304388 123/288 (43%)
MhpC 57..334 CDD:223669 119/279 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850099
Domainoid 1 1.000 234 1.000 Domainoid score I2376
eggNOG 1 0.900 - - E1_KOG2931
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40903
Inparanoid 1 1.050 241 1.000 Inparanoid score I3317
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55737
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000626
OrthoInspector 1 1.000 - - otm42388
orthoMCL 1 0.900 - - OOG6_103361
Panther 1 1.100 - - O PTHR11034
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5286
SonicParanoid 1 1.000 - - X370
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.830

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