Sequence 1: | NP_059006.1 | Gene: | Sema3a / 29751 | RGDID: | 3657 | Length: | 772 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
Alignment Length: | 684 | Identity: | 196/684 - (28%) |
---|---|---|---|
Similarity: | 302/684 - (44%) | Gaps: | 113/684 - (16%) |
- Green bases have known domain annotations that are detailed below.
Rat 51 LANSSSYHTFLLDEERSRLYVGAKDHIFSFNLVNIKDFQKIVWPVSYTRRDECKWAGKDILKECA 115
Rat 116 NFIKVLKAYNQTHLYACGTGAFHPICTYI--------EVGHHPEDNIFKLQDSHFENGRGKSPYD 172
Rat 173 PKLLTASLLIDGELYSGTAADFMGRDFAIFRTLGHHHPIRTEQHDSRWLNDPRFISAHLIPESDN 237
Rat 238 PEDDKVYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Rat 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWV 367
Rat 368 PYQ-GRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQF 431
Rat 432 TQIVV-DRVDAEDG-QYDVMFIGTDVGTVLKVVSV----PKETWHDLEEVLLEEMTVFREPTTIS 490
Rat 491 AMELSTKQQQLYIGSTAGVAQLPLHRCDIYGKACAECCLARDPYCAWDGSSCSRYFPTAKRRTRR 555
Rat 556 QDIRNGDPLTH-CSDLQHHDNHHGHSLEERIIYGVENSSTFLECSPKSQRALVYWQFQRRNEDRK 619
Rat 620 EEIRVGDHIIR-----------------TEQGLLLRSLQKKDSGNY--LCHAVEHGFMQTLLKVT 665
Rat 666 LEVIDTEHLEELLHKDDDGDGSKTKEMSSSMTPS 699 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema3a | NP_059006.1 | Sema_3A | 26..518 | CDD:200510 | 154/481 (32%) |
PSI | 516..>552 | CDD:214655 | 9/35 (26%) | ||
Ig_Sema3 | 580..671 | CDD:409455 | 21/109 (19%) | ||
Ig strand B | 594..598 | CDD:409455 | 2/3 (67%) | ||
Ig strand C | 606..610 | CDD:409455 | 0/3 (0%) | ||
Ig strand E | 633..637 | CDD:409455 | 0/3 (0%) | ||
Ig strand F | 647..652 | CDD:409455 | 2/6 (33%) | ||
Ig strand G | 664..667 | CDD:409455 | 1/2 (50%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 677..698 | 3/20 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 729..772 | ||||
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 154/479 (32%) |
PSI | 510..>537 | CDD:214655 | 11/51 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.910 |