Sequence 1: | NP_059006.1 | Gene: | Sema3a / 29751 | RGDID: | 3657 | Length: | 772 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
Alignment Length: | 654 | Identity: | 215/654 - (32%) |
---|---|---|---|
Similarity: | 324/654 - (49%) | Gaps: | 104/654 - (15%) |
- Green bases have known domain annotations that are detailed below.
Rat 42 SNNVITFNGLANSSSYHTFLLDEERSRLYVGAKDHIFSFNLVNI--KDFQKIVWPVSYTRRD--E 102
Rat 103 CKWAGKDILKECANFIKVLKAYNQ-THLYACGTGAFHPICTYIEVGHHPED-----NIFKLQDSH 161
Rat 162 FENGRG----KSPYDPKLLTASLLIDG-------ELYSGTAADFMGRDFAIFRTLGHHHPI---- 211
Rat 212 ----RTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIGQICKND 272
Rat 273 FGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKG 337
Rat 338 SAVCMYSMSDVRRVFLGPYAHRDGPNYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVIT 401
Rat 402 FARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVD--RVDAEDGQYDVMFIGTDVGTVLKVVSV 464
Rat 465 PKETWHDLEEVLLEEMTVFR-EPT-TISAMELSTKQQQLYIGSTAGVAQLPLHRCDIYGKACAEC 527
Rat 528 CLARDPYCAWD--GSSCSRYFPTAKRRTRRQDIRNGDPLTHCSDLQHHDNHHGHSLEERII--YG 588
Rat 589 VENSSTFLECSPKSQRAL----VYWQFQRRNEDRKEEIRVG--DHIIRTEQGLLLRSLQKKDSGN 647
Rat 648 YLCH 651 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema3a | NP_059006.1 | Sema_3A | 26..518 | CDD:200510 | 173/509 (34%) |
PSI | 516..>552 | CDD:214655 | 12/37 (32%) | ||
Ig_Sema3 | 580..671 | CDD:409455 | 26/80 (33%) | ||
Ig strand B | 594..598 | CDD:409455 | 1/3 (33%) | ||
Ig strand C | 606..610 | CDD:409455 | 2/7 (29%) | ||
Ig strand E | 633..637 | CDD:409455 | 2/3 (67%) | ||
Ig strand F | 647..652 | CDD:409455 | 3/5 (60%) | ||
Ig strand G | 664..667 | CDD:409455 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 677..698 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 729..772 | ||||
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 169/493 (34%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | 26/80 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11361 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H31358 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D153798at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm45857 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.920 |