DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hivep2 and shn

DIOPT Version :10

Sequence 1:NP_077051.2 Gene:Hivep2 / 29721 RGDID:61988 Length:2437 Species:Rattus norvegicus
Sequence 2:NP_001260883.1 Gene:shn / 36171 FlyBaseID:FBgn0003396 Length:2587 Species:Drosophila melanogaster


Alignment Length:2630 Identity:545/2630 - (20%)
Similarity:879/2630 - (33%) Gaps:870/2630 - (33%)


- Green bases have known domain annotations that are detailed below.


  Rat    65 GSGKLASPGEGVHQVTEKQYPPHRPSPYPCQHSLSFPQHS-LPQG--MMHSNKPHQSLEGPPWLF 126
            |.|.|.:.|:.|           |.:......|||.|..: |..|  :|...:.||.::......
  Fly   323 GGGALQASGDAV-----------RTTSLSSNSSLSPPPTTPLANGHHLMTQQQSHQQVQQQQQQQ 376

  Rat   127 SGPLPSVASEDL---FPFPMH----GH------SSGY-----PRKKISSLNPAYSQYSQKSIEQA 173
            ..|.||||..:.   |....|    ||      :|||     .|..:::.|...:..|..:...|
  Fly   377 QTPPPSVAIHEFSANFVNSNHVNAIGHEESIISNSGYKAAGRTRTPLANSNSNTNSTSNSNSNHA 441

  Rat   174 EDA---------HKKEHKP------------------KKPGKYICPYCSRACAKPSVLKKHIRSH 211
            .:|         |::..:|                  :|.|:|:|.||:..|||||||:||||:|
  Fly   442 ANATLSPASFAQHQQLTQPTTVSPGIPGGAAAPNPACEKSGRYVCQYCNLICAKPSVLEKHIRAH 506

  Rat   212 TGERPYPCIPCGFSFKTKSNLYKHRKSHAHAIKA-GL-VPFTESSVSKLDLEAGFIDVEAEIHSD 274
            |.||||||..||.:||||||||||.:|.:||.:| || ||        .|.:.|..|.:||:.:.
  Fly   507 TNERPYPCDTCGIAFKTKSNLYKHCRSRSHAARARGLEVP--------ADADDGLSDQDAELSNS 563

  Rat   275 GEQSTDTDEESSLFAEASDKVSPGPPIPLDIASRGGYPGSLEESLGGPMKVP-ILIIPKSGI--- 335
            ..                           ::.||.|.|  .||.:..|...| .|...||..   
  Fly   564 SS---------------------------ELPSRAGSP--YEEPINSPTPSPSTLSAAKSAYIQQ 599

  Rat   336 -PLPNEGSQYLGPDMLPNPSLN----AKADDSH--TVKQKLALRLSEKKGQDSELSLNLLSPHSK 393
             |||.    |:....|.:|:..    ..||:.|  |.:.:.::.....|.:....||        
  Fly   600 PPLPT----YMQQLPLGSPAAGTLPPTTADNHHSATAQHRQSIDYKPYKPKFHNASL-------- 652

  Rat   394 GSTDSGYFSRSESAEQQISPPNTNAKSYEEIIFGKYCRLSPRNTLSVTPTGQERTAMGRRGLVEP 458
                  |...|:..:||                        :..|.:... |::..:.::.|...
  Fly   653 ------YSCSSKELQQQ------------------------QQQLQIQQQ-QQQHQLAQQKLSIQ 686

  Rat   459 LPHVNTRLEVKMFEDPITQLIPSKGEMDPSQVNMLKTTKFNSECRQPQAMVASVRNEGKPYPGSF 523
            ||.|...........|.||: ..|..::..|:.:        :.:|.|:::|             
  Fly   687 LPLVQQPSLAHPTLSPSTQM-KMKHHINSHQIQL--------QLQQQQSLLA------------- 729

  Rat   524 PGSNPVLLEAPVDSSPLIRSNSMPTSSATNLSIPPSLRGSHSFDERMTGSDDVFYPGTVGIPPQR 588
               ...||.|            ||......|       |..|:..:.|.:         .|....
  Fly   730 ---QQSLLAA------------MPPGGVYYL-------GQPSYYNQDTAA---------AIHQHA 763

  Rat   589 MLRRQAAFELPSVQEGHMEFEHPARVPKSLAGSSLKEKKLVPGDRSGYDYDACRKPYKKWEDPET 653
            :..:|....|...|:...: :||   |...|...:::...:|                       
  Fly   764 LAIQQFQIHLAQQQQQQQQ-QHP---PLVKATPPMQQPPSLP----------------------- 801

  Rat   654 PKQSYR---DISCLSTFKHGGEYFMDPSVPLPGVPTMFGTTCENRKRRKEKSVGDEEDTPMICGG 715
            |:|..|   .||.::|         .|:.|.|..         |.......|.|.:.:...:   
  Fly   802 PQQLVRANSQISSVAT---------APATPTPAA---------NLSTFASSSGGKQVNVAKV--- 845

  Rat   716 MGSAPGSMMSSEYDSKLQDGGRSGFTMTGHESLPHGHSDRLDLARPQLPSRSPSLGSEDLPSAGD 780
                      .|:.|||         ::.:|::.......|....|:..|||.|..:.:..:|..
  Fly   846 ----------QEHISKL---------ISQNEAIVENKEILLQKKYPKQLSRSRSFNNANSNNASQ 891

  Rat   781 PDKMTDLGKKPPGNVISVIQHTNSLSRPNSF--ERSESTEMAVSTQDKTPSPSEMGDSEVLEGPV 843
                       .|:..|.:...||.:..|:.  ||.....:|.:...|.....:....:.:    
  Fly   892 -----------HGSNASALHANNSQNNTNAQMPERETKVNLAQAIFQKQQHQLQQQQQQQI---- 941

  Rat   844 SPEWAPPGDGAESGSRPTPSQQVPQHSYH---GQPRLVRQHNIQVPEIRVTEEPDKPEKEKEAPT 905
                           .....||:.|.:|:   .|.:..:|..::.|...|.....||......|.
  Fly   942 ---------------TQQQQQQLEQQNYYTYIQQQQECQQQQLEPPNGVVKRNAYKPGVVMTTPV 991

  Rat   906 KEPEK--------PVEEFQW---PQRSETLSQLPAEKLP------PKKKRLRLADMEHSSGESSF 953
            |:.::        |::..|:   |....|..:.|...:|      ..|.:..|..:..||..:| 
  Fly   992 KQQQQLPPPPSPLPMQTMQYRQDPATPVTKIEQPTTAVPVMPLNLSAKPKPTLVTVPVSSLSTS- 1055

  Rat   954 ESTGTGLSRSPSQESNLSHSSSFSMSFDRDETVKLTAPPKQDESGK-------HSEFLTVPAGS- 1010
                 .|:.:|:..:|.:.||.             ||||....:..       ::..|.||.|. 
  Fly  1056 -----SLAPTPTTSTNPTSSSK-------------TAPPPAQVNNSIIKNLLLNARGLAVPIGEG 1102

  Rat  1011 ----YSLSVPGHHHQKEMRRCSSEQMPCPHPTEVPEIRSKSFDYGNLSHAPVAGASPSTLSPSRE 1071
                ||..:           |:||.    ...:..::.:.::.....|.||::.||    ||.|.
  Fly  1103 DDAVYSCPI-----------CASEF----RSADDLKLHNSTYCQDASSSAPMSPAS----SPFRS 1148

  Rat  1072 RKKCFLVRQASFSGS-PEIAQGEAGMDPSVKQEQLEQLHAGLRAAWTTVLPPLPGDDPGKQVVGP 1135
            .         |.|.| ||:....|                                         
  Fly  1149 N---------SISLSLPELKSHMA----------------------------------------- 1163

  Rat  1136 CGQLSSGPPLHLAQQQIMHMDSQESLRNPLIQPTSYMTGKHLPEQPHLFPHQDAVPFSPIQNALF 1200
                :|..||.||:   :.....::.|:.|:  .|.::....|.:............:|.     
  Fly  1164 ----NSKNPLSLAK---LAWSQLKTKRSSLV--LSRLSAAQTPARTSTVTAPTVTASAPA----- 1214

  Rat  1201 QFQYPTVCMVHLPAQQP-PWWQA-HFPHPFTPHPQNSYSKPPFQADIHSSYSLEHVAEHTGKKSA 1263
                |.|..|..|:..| |..:| .|.....|.|.....|.|.         :::..:.|.:|:.
  Fly  1215 ----PAVATVTAPSSAPAPQIEALRFVDAPLPSPGPLLGKTPL---------VDYAQQSTPRKAQ 1266

  Rat  1264 D-----------------YPHAKEQTYPCYSGASGLHSKNLPPKFPSDPGSKST---EAPPTEQL 1308
            |                 .|..:.:|......:|.....:....|.:...|.|.   ::...|:|
  Fly  1267 DSVVITKMHEDRQFVIEAQPAKRIKTSDLVVASSSQQPTSFNFSFNNQNSSNSVPELQSSKEERL 1331

  Rat  1309 LREDFASENAGPLQSLPG-TVVPVRIQTHVPSYGSVMYTSISQILGQNSPAIVICKVDENMTQRT 1372
            .|...:..:..|:...|. ...|..|:|.:.|.||....|:.          |..:...:..:|.
  Fly  1332 RRFTSSGGSMIPISECPDLDNSPKMIRTPLLSGGSFQDVSVK----------VNNETGSSSKERK 1386

  Rat  1373 LVTNAAMQGIGFNIAQVLGQRTGLEKYPLWKVPQTLPL-GLESSIPLCLPSTSDSAASLGGSKR- 1435
            |:  |.:.|.|     :||..:|.:.:      |..|: .:.:..||.||..|      ||.|. 
  Fly  1387 LM--ALVSGSG-----LLGVSSGPQHF------QFPPINSITAFNPLTLPPMS------GGDKTT 1432

  Rat  1436 ----------MLSPAS---SLELFMETKQQKRVKEEKMYGQIVEELSAVELTNSDIKKGLSRPQK 1487
                      |..|.|   .:.|.....||.::......|                 :..:|.|.
  Fly  1433 PVTPIPHVPGMPGPGSLTPQMPLLPPPPQQLQLPIPSSRG-----------------RSPNRKQP 1480

  Rat  1488 PQLVRQGCASEPKD----GSSQSRSSSFSSLSPSSSQDHPAASGPFPPNREIL--SGSRAPPRRK 1546
            ..|:..|.:.|.|.    |..|:..|.||...|:            |..|:.|  :...||.:..
  Fly  1481 SPLLLGGGSGELKALSPFGGVQNVPSEFSRQPPT------------PAQRQALQWNSKEAPKKAP 1533

  Rat  1547 F----------SGPSESRESSDELDIDETSSDMSMSPQSSSLPTGGSQQED--------EGKARK 1593
            |          :...|.|..:.|..|.....::.::|.....|.|.:.:|.        ..|::.
  Fly  1534 FNFLRMADNVKTTEPEVRHFNLENVISGKQQELPLTPLHVDTPNGNAPEETSPVASASASAKSKF 1598

  Rat  1594 L-PVSMLV---------HMASGPGGNVANSTLLFT------DVADFQQILQ-----FPSLRTTTT 1637
            | |.|:.:         |....|   .||:..|.:      ..:..|..|.     :..|:.:|.
  Fly  1599 LRPTSLPLKPGTFTPKRHHGITP---TANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTK 1660

  Rat  1638 VSWCFLNYTKPNFVQQATFKSSVYASWCISSCN-PNPSGLNTKTTLALLRSKQKITAEIYTLAAM 1701
            :.:|.:|..:|::| ....|.|:|:.|.:...| |:|.|...|..:||..|:|::.....:.|  
  Fly  1661 MFYCTVNCPQPSYV-AGMHKLSMYSVWQVCEENQPHPLGFKLKQVMALYDSRQRMLGNGSSTA-- 1722

  Rat  1702 HRPGTGKL-----------------TSSSAWKQFAQMKPDAPFLFGNKLERKLGGNVLKERGKGE 1749
             ..|:|||                 ::|||:.|.....|....:           ..|.|     
  Fly  1723 -MAGSGKLSYNLVASQQIVSSPSTSSTSSAFYQGPLKTPPTVTI-----------AALSE----- 1770

  Rat  1750 IHGDKDLGSKQTEPIRIKIFE---------GGYKSNEDYVYVRGRGRGKYICEECGIRCKKPSML 1805
                .::.:|..|..:.|..|         |||:|:|||.|:||||||:|:|.||||||||||||
  Fly  1771 ----ANVAAKANEEAQAKKLETSPSGQPLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSML 1831

  Rat  1806 KKHIRTHTDVRPYVCKLCNFAFKTKGNLTKHMKSKAHMKKCLELGVSMTSVDETETEEAENME-D 1869
            ||||||||||||:.|..|||:|||||||||||:||.|.|||:|||::...:    ..::|.:: |
  Fly  1832 KKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPM----PPDSEFLDVD 1892

  Rat  1870 LHKTSEKHSMSGISTDHQFSDAEESDGEDGDDNDEDDEDDDDFDDQGDLTPKTRSRSTSPQPPRF 1934
            :....:..:.:|..|.   |.|.|||.:|..||:.:..|.|:          ::||....:..| 
  Fly  1893 MDFDQQSSTSAGGRTS---SMAGESDSDDYSDNESESSDTDE----------SKSRQKEHEAAR- 1943

  Rat  1935 SSLPVNVGAVAHGVPSDSSLGHSSLISYLVTLPSIQVTQLMTPSDSCEDTQMTEYQRLFQSKSTD 1999
                                   .|:|..:|.|   :.|.::|....:||.:..........|:.
  Fly  1944 -----------------------GLLSLSMTPP---IPQSVSPYPQLQDTPLPAASPANSIGSSG 1982

  Rat  2000 SEPDKDRLDIPSSMDEEAMLSSEPSSSPRDFSPSSYRSSPGYDSSPCRDNSPKRYLIPKGDLSPR 2064
            |:|.:             ::.|..|..|    |..|:....|.|:| .::.|||.:         
  Fly  1983 SQPKR-------------LVCSFTSPKP----PFDYQKQEQYYSNP-EESKPKRSV--------- 2020

  Rat  2065 RHLSPRRDLSPMRHLSPRKEAALRREMSQGDASPRRHLSPRRPLSPGKDITTRRDLSPRRERRYM 2129
                ...:.:||....||....|                                          
  Fly  2021 ----ANEESAPMDLTKPRGSILL------------------------------------------ 2039

  Rat  2130 TTIRAPSPRRALYHNPPLPMGQYLQTEPIVLGPPNLRRGLPQV-----PYFSLYGDQEGAYEHHG 2189
               .:|||.....|:  ||..|..|...::.|......|..:.     ....:..:.|...:|..
  Fly  2040 ---ISPSPVSVPAHD--LPKSQAQQMHDVIFGTSGNESGFMKTLISVSDKVRISAEMEEQAKHEA 2099

  Rat  2190 SSLFPEGPTDYVFSHLPLHSQQQVR-----------------APIPMV------------PVGGI 2225
                 ||....:.:::..|:..|.:                 |..|::            ||..:
  Fly  2100 -----EGEDVQLQTYIKEHALHQAKIKQSQFSRSYLINTLYTAASPVMSSSSTLFTANSRPVMSV 2159

  Rat  2226 QMVHSL-------PPAI-SGLHPPPTLP-LPTEGSEEKKGAPGEALTKDPYTLSRRHEKQAPHVL 2281
            ..|.|:       |.|| |....|...| :..:.::|:...|..|   :|:..:.....|.|.|.
  Fly  2160 NEVPSIEVHEVKTPEAIESPRSAPEQAPVILAQIAQEENEEPNIA---EPHNANLPAAVQQPDVN 2221

  Rat  2282 QSSGLPSSPSSPRLLMKQSTS-----------EDSLNSTEREQ------EENIQTCTKAIASLRI 2329
            :.:|:..:|::|......:||           ..:.|||:..|      |:..::.|....|..:
  Fly  2222 EFTGVLGNPTAPPTSSVTATSVSTTTAAPVAPSSTANSTQPAQRTVIVGEDGFKSSTPTSKSGDL 2286

  Rat  2330 -------ATEEAALLGADQPTWV------QESPQKPLESAHISIRHFSGPEPGQLCT----SAAH 2377
                   ....|.:.|..:||..      |...|..|   |::|.:.......:.|:    :..|
  Fly  2287 QHVSYGRGVPPAPIAGDARPTCTMCSKTFQRQHQLTL---HMNIHYMERKFKCEPCSISFRTQGH 2348

  Rat  2378 PDLHDGEK---------DTFGTSQTAVAHP 2398
            ...|:..:         .|||...|:...|
  Fly  2349 LQKHERSEAHKNKVMMTSTFGVPTTSNPRP 2378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hivep2NP_077051.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..121 15/58 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..304 0/32 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..416 14/81 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 717..1002 53/313 (17%)
Nuclear localization signal. /evidence=ECO:0000255 934..940 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1284..1305 3/23 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1480..1591 26/134 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1855..1938 17/83 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1993..2125 19/131 (15%)
10 X 4 AA tandem repeats of S-P-[RGMKC]-[RK] 2044..2139 12/94 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2233..2316 22/101 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2364..2437 8/48 (17%)
shnNP_001260883.1 C2H2 Zn finger 486..506 CDD:275368 14/19 (74%)
zf-H2C2_2 499..523 CDD:463886 16/23 (70%)
C2H2 Zn finger 514..536 CDD:275368 14/21 (67%)
PRK12323 <1185..>1269 CDD:481241 19/103 (18%)
zf-C2H2 1816..1838 CDD:395048 19/21 (90%)
C2H2 Zn finger 1818..1838 CDD:275370 18/19 (95%)
zf-H2C2_2 1830..1855 CDD:463886 19/24 (79%)
zf-C2H2 1844..1868 CDD:395048 17/23 (74%)
C2H2 Zn finger 1846..1868 CDD:275370 17/21 (81%)
zf-C2H2_8 <2305..2352 CDD:464935 9/49 (18%)
C2H2 Zn finger 2308..2328 CDD:275368 4/22 (18%)
zf-C2H2_jaz 2333..2359 CDD:432381 3/25 (12%)
C2H2 Zn finger 2336..2358 CDD:275368 3/21 (14%)
C2H2 Zn finger 2381..2403 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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