DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kcnj10 and Irk3

DIOPT Version :9

Sequence 1:XP_017454264.1 Gene:Kcnj10 / 29718 RGDID:61822 Length:381 Species:Rattus norvegicus
Sequence 2:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster


Alignment Length:328 Identity:108/328 - (32%)
Similarity:181/328 - (55%) Gaps:18/328 - (5%)


- Green bases have known domain annotations that are detailed below.


  Rat    26 GIRR--RRVLTKDGRSNVRMEHIADKRFLYLKDLWTTFIDMQWRYKLLLFSATFAGTWFLFGVVW 88
            |:||  .||:.|:|:.||....|.:|.:.|::||.||.::::|:|.|.||..::..:|.||..:.
  Fly   110 GLRRSLNRVMEKNGKENVVFRRIPEKSWRYMRDLVTTLMELEWKYMLTLFLGSYFLSWLLFAALC 174

  Rat    89 YLVAVAHGDLL-------ELGPPANHTPCVVQVHTLTGAFLFSLESQTTIGYGFRYISEECPLAI 146
            |:||.:|||.:       .:|...:  ||:..||:.....::|:|:|||:|:|.:|.|||||..|
  Fly   175 YVVAYSHGDFIFDPVSGKRMGEGVD--PCIYGVHSWVAMIIYSVETQTTLGFGEKYASEECPETI 237

  Rat   147 VLLIAQLVLTTILEIFITGTFLAKIARPKKRAETIRFSQHAVVAYHNGKLCLMIRVANMRKSLLI 211
            .|.:.|::...::|..:.....||.|||.::...::||..||:.|.:|:|||:.||.:.|:...|
  Fly   238 FLFVMQMLSAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRDGRLCLLFRVCDPREQQSI 302

  Rat   212 GCQVTGKLLQTHQTKEGENIRLNQVNVTFQVDTASDSPFLILPLTFYHVVDETSPLKDLPLRS-- 274
            ..::...::...:|:|||.|: :.|.:..:   .:....::.|....||:||||||.......  
  Fly   303 ESKIRVYIIVDKRTREGETIK-SHVELKLE---GNGEQIILWPDVVCHVIDETSPLSQFTTAKLF 363

  Rat   275 GEGDFELVLILSGTVESTSATCQVRTSYLPEEILWGYEFTPAISLSASG-KYVADFSLFDQVVKV 338
            ....|||.:.:.||..:|:...:.:|||||.||.||..|...|...|.. :|:.|:..|::.:.|
  Fly   364 NAAQFELYVSIVGTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYDAQNERYIVDYENFNRTISV 428

  Rat   339 ASP 341
            ..|
  Fly   429 DMP 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcnj10XP_017454264.1 None
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 103/319 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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