Sequence 1: | NP_899155.1 | Gene: | Gabra1 / 29705 | RGDID: | 61855 | Length: | 455 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001287408.1 | Gene: | GluClalpha / 42350 | FlyBaseID: | FBgn0024963 | Length: | 463 | Species: | Drosophila melanogaster |
Alignment Length: | 481 | Identity: | 166/481 - (34%) |
---|---|---|---|
Similarity: | 250/481 - (51%) | Gaps: | 60/481 - (12%) |
- Green bases have known domain annotations that are detailed below.
Rat 6 GLSDYLWAWTLILSTLSGRSYGQPSQDELKDNTTVFTRILDRLLDG--YDNRLRPGLGERVTE-- 66
Rat 67 --VKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKF---KGPMTVLRLNNLMASKIWTPDTF 126
Rat 127 FHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRA 191
Rat 192 EVVYEWTR-EPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQ 255
Rat 256 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCY 320
Rat 321 AFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARGDPGL 385
Rat 386 ATIAKSATI---------------EP----KEVKPETKPPEPK-----KTFNS-----VSKIDRL 421
Rat 422 SRIAFPLLFGIFNLVYWATYLNREPQ 447 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gabra1 | NP_899155.1 | LIC | 7..441 | CDD:273305 | 160/472 (34%) |
LGIC_ECD_GABAAR_A1 | 55..248 | CDD:349835 | 68/200 (34%) | ||
Cys-loop | 165..179 | CDD:349835 | 6/13 (46%) | ||
GluClalpha | NP_001287408.1 | LIC | 3..455 | CDD:273305 | 160/472 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |