DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prkar2a and Pka-R2

DIOPT Version :9

Sequence 1:NP_062137.1 Gene:Prkar2a / 29699 RGDID:3393 Length:401 Species:Rattus norvegicus
Sequence 2:NP_523671.1 Gene:Pka-R2 / 36041 FlyBaseID:FBgn0022382 Length:377 Species:Drosophila melanogaster


Alignment Length:397 Identity:193/397 - (48%)
Similarity:265/397 - (66%) Gaps:32/397 - (8%)


- Green bases have known domain annotations that are detailed below.


  Rat     4 IQIPPGLTELLQGYTVEVLRQQPPDLVDFAVEYFTRLREARRQESDSFIAPPTTFHAQESSGVPV 68
            ||:|..|.|:|..:::..|.:||||::|:||||||:|:..|          |:..|..:|:    
  Fly     9 IQVPEELKEVLLQFSISFLVEQPPDVIDYAVEYFTKLQSER----------PSVSHTDQST---- 59

  Rat    69 IEEDGESESDSDDEDLEVPIPSKFTRRVSVCAETFNPDEEEDND-PRVVHPKTDEQRYRLQEACK 132
               |.:...:|.|.|.|.|:.:. :||.||.||.::|:.::|:| ...|.|||||||.||.|:.|
  Fly    60 ---DDQLSVNSQDADAEPPVMAS-SRRKSVFAEAYDPEADDDDDGATAVFPKTDEQRARLVESVK 120

  Rat   133 DILLFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQY 197
            ::|||::|::||::||||||||:.|:..:.:|.||||||||||||.|.|.:.:    ..:.:..|
  Fly   121 NVLLFRSLEKEQMNQVLDAMFERKVQPGDFIIRQGDDGDNFYVIESGVYKVYI----NDKHINTY 181

  Rat   198 DNRGSFGELALMYNTPRAATIVATSDGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLFKSL 262
            ::.|.||||||:||.|||||:.|.:.|.||.:||.|||||::|:..:||||:|..:.|||:.|:|
  Fly   182 NHTGLFGELALLYNMPRAATVQAETSGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKAL 246

  Rat   263 EMSERMKIVDVIGEKIYKDGERIITQGEKADSFYIIESGEVSILIRSKTKTNKNGGNQEVEIAHC 327
            :..|||.:.|.:..|.|.:|||||.||:.||..|.||.|.||:        ..:..:.||||:..
  Fly   247 QNYERMNLADALVSKSYDNGERIIKQGDAADGMYFIEEGTVSV--------RMDQDDAEVEISQL 303

  Rat   328 HKGQYFGELALVTNKPRAASAYAVGD-VKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFG 391
            .||||||||||||::|||||.||.|. ||...:||:|||||||||||||||||..||.||||:||
  Fly   304 GKGQYFGELALVTHRPRAASVYATGGVVKLAFLDVKAFERLLGPCMDIMKRNIDDYESQLVKIFG 368

  Rat   392 SNLDLLD 398
            |..::.|
  Fly   369 SKNNITD 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prkar2aNP_062137.1 Dimerization and phosphorylation 2..135 50/131 (38%)
DD_RIIalpha_PKA 4..44 CDD:213050 19/39 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..85 7/29 (24%)
Crp 132..>241 CDD:223736 57/108 (53%)
CAP_ED 136..248 CDD:237999 58/111 (52%)
Crp 252..>368 CDD:223736 58/116 (50%)
CAP_ED 258..379 CDD:237999 66/121 (55%)
Pka-R2NP_523671.1 DD_RII_PKA 11..49 CDD:213046 17/37 (46%)
CAP_ED 124..233 CDD:237999 59/112 (53%)
CAP_ED 242..356 CDD:237999 66/121 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354333
Domainoid 1 1.000 93 1.000 Domainoid score I7365
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3064
Inparanoid 1 1.050 361 1.000 Inparanoid score I2127
OMA 1 1.010 - - QHG54324
OrthoDB 1 1.010 - - D1047290at2759
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 1 1.000 - - otm45220
orthoMCL 1 0.900 - - OOG6_100449
Panther 1 1.100 - - O PTHR11635
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X421
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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