DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpa2 and CG32379

DIOPT Version :9

Sequence 1:NP_001013101.2 Gene:Cpa2 / 296959 RGDID:1305563 Length:417 Species:Rattus norvegicus
Sequence 2:NP_729252.2 Gene:CG32379 / 326211 FlyBaseID:FBgn0052379 Length:344 Species:Drosophila melanogaster


Alignment Length:343 Identity:107/343 - (31%)
Similarity:182/343 - (53%) Gaps:15/343 - (4%)


- Green bases have known domain annotations that are detailed below.


  Rat    84 IDYSIMIEDVQVLLDQEREEMLFNQQRERGGNFN-FEAYHTLEEIYQEMDNLVAENPGLVSKVNI 147
            ::|.::|||:..|:..:|.|.|..:...:..:.: ..|::|..||...:|:|:...|..|.....
  Fly     6 LEYKVLIEDLAPLVHAQRAENLRKKLLIQWPHIDVLSAFYTHSEINDYLDSLLERFPKRVQVKQF 70

  Rat   148 GSSFENRPMNVLKFSTGG---DKPAIWLDAGIHAREWVTQATALWTANKIASDYGTDPAITSLLN 209
            |.|:|.||:.||..:.|.   :||.|.:|..:|||||::.:.||:...::..:||.:   ..||.
  Fly    71 GWSYERRPLKVLTITNGDGRRNKPVILIDGTVHAREWISPSMALYIIQQLLDNYGDN---QELLQ 132

  Rat   210 TLDIFLLPVTNPDGYVFSQTTNRMWRKTRSKRSGSGCVGVDPNRNWDANFG-GPGASSSPCSDSY 273
            ..|..::||.|.|||.::.|.:|.|||:|...|...|:|.|.|||:...:| ..|:||.||.:.|
  Fly   133 DYDWVIMPVVNADGYEYTHTDSRYWRKSRRPTSNPECIGTDINRNFGYEWGHDEGSSSDPCENIY 197

  Rat   274 HGPKPNSEVEVKSIVDFIKSH-GKVKAFITLHSYSQLLMFPYGYKCTKPDDFNELDEVAQKAAQA 337
            .|.:|..:.|.:.:.|.:..: |::..:::||||....:.|:||....||.:.::..||...|:|
  Fly   198 RGERPFDQSESQVLRDVMLHYKGRLNFYLSLHSYGNYFLLPWGYTSDFPDTYQDMMSVADAGAKA 262

  Rat   338 LKRLHGTS--YKVGPICSVIYQASGGSIDWAYD-LGIKYSFAFELRDTGFYGFLLPAKQILPTAE 399
            :  ::.|:  |..|....|:|..||.:.|:|:. :....:...||...||.||.....||.....
  Fly   263 I--IYSTNGIYSYGSTYYVLYPTSGDTTDFAFGVVNATVAMTMELPAAGFQGFDPWISQIERLVT 325

  Rat   400 ETWLGLKTI-MEHVRDHP 416
            |:|:|::.: .|.:|.:|
  Fly   326 ESWVGVRAMAAEVIRRYP 343

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cpa2NP_001013101.2 Propep_M14 33..100 CDD:396700 5/15 (33%)
M14_CPA 116..415 CDD:349442 98/308 (32%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P00730 177..180 2/2 (100%)