Sequence 1: | XP_038965308.1 | Gene: | Gabrr2 / 29695 | RGDID: | 61902 | Length: | 491 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001287408.1 | Gene: | GluClalpha / 42350 | FlyBaseID: | FBgn0024963 | Length: | 463 | Species: | Drosophila melanogaster |
Alignment Length: | 449 | Identity: | 149/449 - (33%) |
---|---|---|---|
Similarity: | 238/449 - (53%) | Gaps: | 53/449 - (11%) |
- Green bases have known domain annotations that are detailed below.
Rat 68 KKNLDVTKIRTGKPRPLLRVEDHDFTMRPA----FGGPAIPVGVDVQVESLDSISEVDMDFTMTL 128
Rat 129 YLRHYWRDERLAFPSSSNRSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVL 193
Rat 194 YSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQK 258
Rat 259 FHT---TSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARV 320
Rat 321 SLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTV-------- 377
Rat 378 QEQKERKLRDKFPCTCGMLHSRTMTLDGSYSESEANSLAGYPRSHILPEEERQDKIVVH-----L 437
Rat 438 ALNSEL------TSSRKKGLLKGQMGLYIFQNTHAIDKYSRLIFPAFYIVFNLIYWSVF 490 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gabrr2 | XP_038965308.1 | LIC | 87..490 | CDD:273305 | 144/428 (34%) |
LGIC_ECD_GABAAR_rho | 102..287 | CDD:349806 | 65/187 (35%) | ||
GluClalpha | NP_001287408.1 | LIC | 3..455 | CDD:273305 | 149/447 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |