Sequence 1: | NP_058987.3 | Gene: | Gabrr1 / 29694 | RGDID: | 61900 | Length: | 480 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 569 | Identity: | 172/569 - (30%) |
---|---|---|---|
Similarity: | 256/569 - (44%) | Gaps: | 149/569 - (26%) |
- Green bases have known domain annotations that are detailed below.
Rat 50 AHDDAHKQ---------GSPILKRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQ 105
Rat 106 VESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFFVHSKRS 167
Rat 168 FIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWK 232
Rat 233 KGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMV 297
Rat 298 MLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLE 362
Rat 363 YAAVNYLT-TVQERKER-----KLREK----------------ISCTCGLPQPRGVMLDSSYSDG 405
Rat 406 EVNDLG---GYMPENG-------------EKPDRMM----------------------------- 425
Rat 426 ---------------VQLTLASERGSPQRKS-----------------------QRGSYVSMRIN 452
Rat 453 THA----------------------IDKYSRIIFPAAYILFNLIYWSIF 479 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gabrr1 | NP_058987.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 31..67 | 5/25 (20%) | |
LIC | 76..479 | CDD:273305 | 164/532 (31%) | ||
LGIC_ECD_GABAAR_rho | 97..282 | CDD:349806 | 72/187 (39%) | ||
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 71/185 (38%) |
Neur_chan_memb | 274..588 | CDD:397193 | 81/313 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
4 | 3.770 |