DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp11a1 and Cyp12c1

DIOPT Version :9

Sequence 1:NP_058982.1 Gene:Cyp11a1 / 29680 RGDID:69325 Length:526 Species:Rattus norvegicus
Sequence 2:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster


Alignment Length:528 Identity:136/528 - (25%)
Similarity:238/528 - (45%) Gaps:70/528 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat    20 LSPVWQGPGLATGNGAGISSTNSPRSFNEIPSPGDNGWINLYHFLRENGTHRIHYHH--MQNFQK 82
            |...|:|                .:.|.|:|.|  ..| .|:...::.|    .||.  |.:..:
  Fly    31 LESEWEG----------------AKPFTELPGP--TRW-QLFRGFQKGG----EYHQLGMDDVMR 72

  Rat    83 YGPIYREKLGNM----------ESVYILDPKDAATLFSCEGPNPERYLVPPWVAYH-----QYYQ 132
               :|:::.|::          .:|:..:.:....::..||..|.|....|.:.|.     ::::
  Fly    73 ---LYKKQFGDICLIPGLFGMPSTVFTFNVETFEKVYRTEGQWPVRGGAEPVIHYRNKRKDEFFK 134

  Rat   133 RPIGVLFKSSDAWRKDRIVLNQEVMAPDSIKNFVPLLEGVAQDFIKVLHRRIKQQNSGKFSGDIS 197
            ..:| ||.:...|.|:|..:|..:|...::..::..::.|.:.|:..: |.|:.:.|.:..||..
  Fly   135 NCMG-LFGNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVNRI-REIRDKESQEVPGDFM 197

  Rat   198 DDLFRFAFESITSVVFGERLGMLEEI-VDPESQRF---IDAVYQMFHTSVPMLNMPPDLFRLFRT 258
            :.:....|||:.:|.....||:|.|. ..||:.:.   |:.:...|..    |.:.|.|:|...|
  Fly   198 NTINHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVLMDSFFD----LGVRPSLYRYIPT 258

  Rat   259 KTWKDHAAAWDVIFSKADEYTQNFYWDLRQKR---DFSKYPGVLYSLLGGNKLPFKNIQANITEM 320
            .|:|..:.|.|.||.....|.......:.:|.   |.:.:..||..||   ::..|.......:|
  Fly   259 PTYKKFSRAMDEIFDTCSMYVNQAIERIDRKSSQGDSNDHKSVLEQLL---QIDRKLAVVMAMDM 320

  Rat   321 LAGGVDTTSMTLQWNLYEMAHNLKVQEMLRAEVLAARRQAQGDM-AKMVQLVPLLKASIKETLRL 384
            |.|||||||..:...|..:|.|.:.|:.||.|||:.......:. .:.::.:|.|:|.|||:|||
  Fly   321 LMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRL 385

  Rat   385 HPISVTLQRYIVNDLVLRNYKIPAKTLVQVASYAMGRESSFFPNPNKFDPTRWLEK--------- 440
            :|::....|....|:||..|:||..|.:.:.:..:.::...:|...:|.|.|||.:         
  Fly   386 YPVTFGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVL 450

  Rat   441 -SQNTTHFRYLGFGWGVRQCLGRRIAELEMTIFLINVLENFRIEVQSIRDVGTKFNLILMPEKPI 504
             :::...|.||.||:|.|.|:|:||.:|||.:.:.|::.||.||.....:...|...:..|..|:
  Fly   451 MNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYSTEKPYKCRFLYKPNIPL 515

  Rat   505 FFNFQPLK 512
            .|.|..||
  Fly   516 KFKFTDLK 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp11a1NP_058982.1 cytochrome_P450 80..505 CDD:425388 119/457 (26%)
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 124/475 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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