DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp11a1 and Cyp12d1-d

DIOPT Version :10

Sequence 1:NP_058982.1 Gene:Cyp11a1 / 29680 RGDID:69325 Length:526 Species:Rattus norvegicus
Sequence 2:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster


Alignment Length:562 Identity:135/562 - (24%)
Similarity:239/562 - (42%) Gaps:115/562 - (20%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 RSVLVKSCQPFLSPV--WQGPGLATGNGAGISSTNSPRSFNEIPSPGDNGWINLYHFLR------ 65
            |||.:     ::.||  .:...:.....|..|.|...::::|||.|      |.:.|:|      
  Fly     8 RSVAI-----YVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRP------NKFKFMRAFMPGG 61

  Rat    66 --ENGTHRIHYHHMQNFQKYGPIY--REKLGNMESVYILDPKDAATLFSCEGPNPERYLVPPWVA 126
              :|.:...:...|:  ::||.||  ....|..:.|...:.||...:|..||..|.|..:.. :.
  Fly    62 EFQNASITEYTSAMR--KRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDS-IV 123

  Rat   127 YHQYYQRP------IGVLFKSSDAWRKDRIVLNQEVMAPDSIKNFVPLLEGVAQDFIKVLHRRIK 185
            |.:.:.||      .|::...::||.|.|..:|...|.|..::.:...|..:..:||:.: :.|:
  Fly   124 YFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERI-KEIR 187

  Rat   186 QQNSGKFSGDISDDLFRFAFESITSVVFGERLGMLEEIVDPESQRFIDAVYQMFHTSVPM----- 245
            ...:.:...|.:|::.|..|||:..|.|..::|::.:..|..     ||: .:|.||..:     
  Fly   188 DPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNS-----DAL-TLFQTSRDIFRLTF 246

  Rat   246 -LNMPPDLFRLFRTKTWKDHAAAWDVIFSKADEYTQNFYWDLRQKRDFSKYPGVLYSLL------ 303
             |::.|.::::..|.|::                        :.||..:....|...:|      
  Fly   247 KLDIQPSMWKIISTPTYR------------------------KMKRTLNDSLNVSQKMLKENQDA 287

  Rat   304 ------GGNKLPFKNIQANITE------------MLAGGVDTTSMTLQWNLYEMAHNLKVQEMLR 350
                  .|.|:...::...:.|            :|..|||.|:..|...|..::.:...|..||
  Fly   288 LEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLR 352

  Rat   351 AEVLA--------ARRQAQGDMAKMVQLVPLLKASIKETLRLHPISVTLQRYIVNDLVLRNYKIP 407
            .|:|:        ...:...||       |.|:|.||||||.:|......|...||::|..|::|
  Fly   353 EELLSIMPTKDSLLNEENMKDM-------PYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVP 410

  Rat   408 AKTLVQVASYAMGRESSFFPNPNKFDPTRWLE-----KSQNTTHFRYLGFGWGVRQCLGRRIAEL 467
            ..|.|.:.|..:.:|::::|.|::|.|.|||.     |....:.|.:|.||:|.|.|:|:|:.:|
  Fly   411 KGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDL 475

  Rat   468 EMTIFLINVLENFRIEVQSIRDVGTKFNLILMPEKPIFFNFQ 509
            ||...:..::.||.:|..  ||....|..:.:.|..|.|.|:
  Fly   476 EMETTVAKLIRNFHVEFN--RDASRPFKTMFLMEPAITFPFK 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp11a1NP_058982.1 cytochrome_P450 80..505 CDD:477761 115/475 (24%)
Cyp12d1-dNP_995812.1 CYP24A1-like 76..515 CDD:410677 117/481 (24%)

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