DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp11a1 and Cyp12d1-p

DIOPT Version :9

Sequence 1:NP_058982.1 Gene:Cyp11a1 / 29680 RGDID:69325 Length:526 Species:Rattus norvegicus
Sequence 2:NP_001286304.1 Gene:Cyp12d1-p / 246648 FlyBaseID:FBgn0050489 Length:521 Species:Drosophila melanogaster


Alignment Length:550 Identity:134/550 - (24%)
Similarity:242/550 - (44%) Gaps:91/550 - (16%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 RSVLVKSCQPFLSPV--WQGPGLATGNGAGISSTNSPRSFNEIPSPGDNGWINLYHFLR------ 65
            |||.:     ::.||  .:...:.....|..|.|...::::|||.|      |.:.|:|      
  Fly     8 RSVAI-----YVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRP------NKFKFMRAFMPGG 61

  Rat    66 --ENGTHRIHYHHMQNFQKYGPIY--REKLGNMESVYILDPKDAATLFSCEGPNPERYLVPPWVA 126
              :|.:...:...|:  ::||.||  ....|..:.|...:.||...:|..||..|.|..:.. :.
  Fly    62 EFQNASITEYTSAMR--KRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDS-IV 123

  Rat   127 YHQYYQRP------IGVLFKSSDAWRKDRIVLNQEVMAPDSIKNFVPLLEGVAQDFIKVLHRRIK 185
            |.:.:.||      .|::...::||.|.|..:|...|.|..::.:...|..:..:||:.: :.|:
  Fly   124 YFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERI-KEIR 187

  Rat   186 QQNSGKFSGDISDDLFRFAFESITSVVFGERLGMLEEIVDPESQRFIDAVYQMFHTSVPM----- 245
            ...:.:...|.:|::.|..|||:..|.|..::|::.:..|..     ||: .:|.||..:     
  Fly   188 DPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNS-----DAL-TLFQTSRDIFRLTF 246

  Rat   246 -LNMPPDLFRLFRTKTWKDHAAAWDVIFSKADEYTQNFYWDLRQKRDFSKYPGVLYSLLGGNKLP 309
             |::.|.::::..|.|::......:...:.|.:..:.....|.::|.            .|.|:.
  Fly   247 KLDIQPSMWKIISTPTYRKMKRTLNDSLNVAQKMLKENQDALEKRRQ------------AGEKIN 299

  Rat   310 FKNIQANITE------------MLAGGVDTTSMTLQWNLYEMAHNLKVQEMLRAEVLA------- 355
            ..::...:.|            :|..|||.|:..|...|..::.:...|..||.|:|:       
  Fly   300 SNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDS 364

  Rat   356 -ARRQAQGDMAKMVQLVPLLKASIKETLRLHPISVTLQRYIVNDLVLRNYKIPAKTLVQVASYAM 419
             ...:...||       |.|:|.||||||.:|..:...|...||::|..|::|..|.|.:.|..:
  Fly   365 LLNEENMKDM-------PYLRAVIKETLRYYPNGLGTMRTCQNDVILSGYRVPKGTTVLLGSNVL 422

  Rat   420 GRESSFFPNPNKFDPTRWLE-----KSQNTTHFRYLGFGWGVRQCLGRRIAELEMTIFLINVLEN 479
            .:|::::|.|::|.|.|||.     |....:.|.:|.||:|.|.|:|:|:.:|||...:..::.|
  Fly   423 MKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRN 487

  Rat   480 FRIEVQSIRDVGTKFNLILMPEKPIFFNFQ 509
            |.:|..  ||....|..:.:.|..|.|.|:
  Fly   488 FHVEFN--RDASRPFKTMFVMEPAITFPFK 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp11a1NP_058982.1 cytochrome_P450 80..505 CDD:425388 114/463 (25%)
Cyp12d1-pNP_001286304.1 p450 70..508 CDD:299894 114/468 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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