DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psma2 and Prosalpha2

DIOPT Version :10

Sequence 1:NP_058975.1 Gene:Psma2 / 29669 RGDID:61842 Length:234 Species:Rattus norvegicus
Sequence 2:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster


Alignment Length:233 Identity:181/233 - (77%)
Similarity:209/233 - (89%) Gaps:0/233 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKV 65
            ||...||||||||||||||||:|||||||:||||||||.|:||||:|||.|.||.||::.|||:|
  Fly     1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRV 65

  Rat    66 EPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPF 130
            |.|..|||:||||||||||:||.:|||:||.|||.|:||||.:|||||||::|||||||||||||
  Fly    66 EMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPF 130

  Rat   131 GVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTL 195
            |||||||||:..||||:|||||||||||||||||||.|||||||||||:|||||:||:|||||||
  Fly   131 GVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTL 195

  Rat   196 KESFEGQMTEDNIEVGICNEAGFRRLTPTEVRDYLAAI 233
            ||.|||:||.||||:|||::.||:||.|..::||||:|
  Fly   196 KEGFEGKMTADNIEIGICDQNGFQRLDPASIKDYLASI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Psma2NP_058975.1 proteasome_alpha_type_2 6..231 CDD:239719 176/224 (79%)
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 176/224 (79%)

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