Protein Alignment Srsf5 and x16

DIOPT Version :10

• Sequence 1: XP_038967784.1
• Gene: Srsf5 / 29667
• RGDID: 3664
• Length: 270
• Species: Rattus norvegicus
• Sequence 2: NP_723226.1
• Gene: x16 / 33967
• FlyBaseID: FBgn0028554
• Length: 258
• Species: Drosophila melanogaster
• Alignment Length: 318
• Identity: 89/318 - (27%)
• Similarity: 115/318 - (36%)
• Gaps: 137/318 - (43%)

  Rat     5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGKELCSER 66
            :|::|.|...||:.|:|..|..||.:|.:.:.|   ||.|||||..|||.|||..|||:.:|..|
  Fly     9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRR 73

  Rat    67 VTIE-----HARA------------------RSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTEN 108
            ..:|     :||:                  |.|||.|||
  Fly    74 ARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRG------------------------- 113

  Rat   109 RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRK 173
                            .|...:.|              |...||
  Fly   114 ----------------DDKCYECG--------------GRGHFA--------------------- 127

  Rat   174 IKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRRSKSYSRSRSRSRSRSKSRSGSRSPVPEKSQ 238
                    ||.|.| ::|.|.||:|.|||||.|||.::.|:|.:||||||....|.||.......
  Fly   128 --------RHCRER-KARQRRRSNSFSRSRSTSRRRRTRSKSGTRSRSRSAGSVGRRSGRSNGRD 183

  Rat   239 KRGSSSR-----SKSPASVD---------------------RQRSRSRSRSRSVDSGN 270
            :.||:||     .....:||                     |.||||||.|.:|..|:
  Fly   184 ENGSASRYSDHERNGSGAVDSPPPPKRRYEDEDDDRVRGSPRSRSRSRSASPAVRRGS 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srsf5	XP_038967784.1	RRM1_SRSF5	5..74	CDD:410008	32/76 (42%)
		RRM2_SRSF5	99..179	CDD:410158	5/79 (6%)
x16	NP_723226.1	RRM_SRSF3_like	9..81	CDD:409808	31/71 (44%)