DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdi2 and Gdi

DIOPT Version :9

Sequence 1:NP_058972.2 Gene:Gdi2 / 29662 RGDID:61802 Length:445 Species:Rattus norvegicus
Sequence 2:NP_001245953.1 Gene:Gdi / 34264 FlyBaseID:FBgn0004868 Length:443 Species:Drosophila melanogaster


Alignment Length:442 Identity:296/442 - (66%)
Similarity:363/442 - (82%) Gaps:4/442 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPGQPPAS 65
            ||||||.|||||||.||||||::||:||||||:|:|.|||||||||||||:|::|:.|  :||..
  Fly     1 MNEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFQRYGL--EPPGE 63

  Rat    66 -MGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALAS 129
             .|||||||||||||||||||||||:|:.|.||||::||.||||:|||||||.|||..:.|||||
  Fly    64 RFGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGKIAKVPVDQKEALAS 128

  Rat   130 SLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRT 194
            .|||:|||||||.||:||.:|.|.||:|::..||.|.:|:.:|.||.|.::..|||||:|||:|.
  Fly   129 DLMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTKANMQGLYDKFGLDKNTQDFTGHALALFRD 193

  Rat   195 DDYLDQPCCETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEII 259
            |:||::|...||.||||||:|||||||||||||:|||||||||||||||||||||||:|||:||:
  Fly   194 DEYLNEPAVNTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDKPIDEIV 258

  Rat   260 V-QNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQ 323
            : :.||||||:|..|:|:|||:.||||||.::|.|.|:|||.||||.||:.:|.|..|.||||||
  Fly   259 LGEGGKVVGVRSGEEVAKCKQVYCDPSYVPEKVRKRGKVIRCICILDHPVASTKDGLSTQIIIPQ 323

  Rat   324 NQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLFV 388
            .||.|||||||.::|..|.|||:|.::.:|||||||:.||.||:|.|:|||||.||||:|||...
  Fly   324 KQVGRKSDIYVSLVSSTHQVAAKGWFVGMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLE 388

  Rat   389 PKDLGTDSQIFISRAYDATTHFETTCDDIKDIYKRMTGSEFDFEEMKRKKND 440
            |.|.|::||||||.:|||||||||||.|:.:|:||.||..|||.::|.:..|
  Fly   389 PIDDGSESQIFISESYDATTHFETTCLDVLNIFKRGTGETFDFSKIKHELGD 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdi2NP_058972.2 GDI 1..436 CDD:395792 294/436 (67%)
GdiNP_001245953.1 GDI 1..435 CDD:279353 294/435 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344455
Domainoid 1 1.000 616 1.000 Domainoid score I176
eggNOG 1 0.900 - - E1_COG5044
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 619 1.000 Inparanoid score I849
OMA 1 1.010 - - QHG53557
OrthoDB 1 1.010 - - D388394at33208
OrthoFinder 1 1.000 - - FOG0001483
OrthoInspector 1 1.000 - - otm45174
orthoMCL 1 0.900 - - OOG6_100967
Panther 1 1.100 - - LDO PTHR11787
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X942
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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