Sequence 1: | NP_001106655.1 | Gene: | Gria4 / 29629 | RGDID: | 61863 | Length: | 902 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_647962.1 | Gene: | Ir64a / 38616 | FlyBaseID: | FBgn0035604 | Length: | 859 | Species: | Drosophila melanogaster |
Alignment Length: | 696 | Identity: | 126/696 - (18%) |
---|---|---|---|
Similarity: | 224/696 - (32%) | Gaps: | 213/696 - (30%) |
- Green bases have known domain annotations that are detailed below.
Rat 291 ETPPKYTSALTYDGVLVMAETF----RSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQ 351
Rat 352 VRIQGLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTAAIENR- 415
Rat 416 ---------TVVVTTIMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIA------ 465
Rat 466 IVPDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 530
Rat 531 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVV-LFLVSRFSPYEW--------------------- 573
Rat 574 --------------------------------HTEEPEDG----------------------KEG 584
Rat 585 PSDQPPNEFGIF-NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Rat 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVA 713
Rat 714 ---------RVRKSKGK-----------------------------------FAFLLE-----ST 729
Rat 730 MNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGE 794
Rat 795 CGSGGGDSKDKTSAL--SLSNVAGVFYILVGGLGLAMLVALIEFCY 838 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria4 | NP_001106655.1 | PBP1_iGluR_AMPA_GluR4 | 28..398 | CDD:107383 | 22/110 (20%) |
ANF_receptor | 39..380 | CDD:279440 | 21/92 (23%) | ||
PBP2_iGluR_AMPA_GluR4 | 414..795 | CDD:270445 | 92/522 (18%) | ||
Lig_chan | 546..825 | CDD:278489 | 71/406 (17%) | ||
Ir64a | NP_647962.1 | Periplasmic_Binding_Protein_Type_2 | 351..>465 | CDD:304360 | 24/127 (19%) |
Lig_chan | 563..828 | CDD:278489 | 56/277 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350046 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |