Sequence 1: | NP_001106213.1 | Gene: | Gria3 / 29628 | RGDID: | 70958 | Length: | 888 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_647962.1 | Gene: | Ir64a / 38616 | FlyBaseID: | FBgn0035604 | Length: | 859 | Species: | Drosophila melanogaster |
Alignment Length: | 796 | Identity: | 149/796 - (18%) |
---|---|---|---|
Similarity: | 249/796 - (31%) | Gaps: | 259/796 - (32%) |
- Green bases have known domain annotations that are detailed below.
Rat 248 DILLERVMHGGAN------ITGFQIVNNENPMVQQFIQRW----VRLD---------------ER 287
Rat 288 EFPEAKNAPLKYTSALTHDAILVIAEAFRYL---------RRQRVDVSRRGSAGDCLANPAVPWS 343
Rat 344 QGIDIERALKMVQVQGMTG--NIQFDT-------YGRRTNYTI-DVYEMKVSGSRKAGYWN--EY 396
Rat 397 ERFVPFSDQQISN------------DSSSSENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYC 449
Rat 450 VDLAYEIAKHV----RIKYKLSIVGDGKYGARD--------PETKIW--------NGMVGELVYG 494
Rat 495 RADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 559
Rat 560 VSVV-LFLVSRFSPYEWHL---------------------------------------------- 577
Rat 578 ---EDNNEEPRDPQSPPD-------------------------PPNEFGIF-NSLWFSLGAFMQQ 613
Rat 614 GCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDS 678
Rat 679 GSTKEFFRRSKIAVYEKMW--------------------------------SY---MKSAEPSVF 708
Rat 709 TKTTA-----DGVARVRKSKGKFAFLLE-----STMNEYIEQRKPCDTMKVGGNLDSKGYGVATP 763
Rat 764 KGSALGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSAL--SLSNVAGVFYILV 826
Rat 827 GGLGLAMMVALIEFCY 842 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria3 | NP_001106213.1 | PBP1_iGluR_AMPA_GluR3 | 29..400 | CDD:107382 | 37/197 (19%) |
ANF_receptor | 40..383 | CDD:279440 | 33/178 (19%) | ||
PBP2_iGluR_AMPA | 416..799 | CDD:270433 | 97/523 (19%) | ||
Glutamate binding | 502..504 | 1/1 (100%) | |||
Lig_chan | 548..829 | CDD:278489 | 74/403 (18%) |