DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tcf15 and Fer1

DIOPT Version :10

Sequence 1:NP_001162051.1 Gene:Tcf15 / 296272 RGDID:1308464 Length:195 Species:Rattus norvegicus
Sequence 2:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster


Alignment Length:192 Identity:62/192 - (32%)
Similarity:85/192 - (44%) Gaps:44/192 - (22%)


- Green bases have known domain annotations that are detailed below.


  Rat    25 EENRSESDASDQSFGCCEGLEA------------ARRGPGPGSGRRASGGAGPVVVVRQRQAANA 77
            :|:.||||..|.::.  .|..:            :||...|...:.||      .:.:||||||.
  Fly    37 DEHSSESDDEDDAYS--SGFNSDQENTEKTFCPFSRRSHKPRRLKCAS------QMAQQRQAANL 93

  Rat    78 RERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDAADDGQPCFRAA 142
            |||.|.||:|.||..|||.|||.|.:::|||::||:||.|||..|:.  ::....:..:|     
  Fly    94 RERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSE--MVKKDKNGNEP----- 151

  Rat   143 GGGKSAVPAADGRQPRSICTFCLSNQRKGGSRRDLG---------GSCLKVRGVAP--LRGP 193
              |.|.........|:.|    :...|.||....|.         ||.|..|...|  .|||
  Fly   152 --GLSLQRNYQKEPPKKI----ILKDRTGGVAHSLSWYRKGDRYPGSKLYARTWTPEDPRGP 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tcf15NP_001162051.1 bHLH_TS_TCF15_paraxis 64..129 CDD:381476 33/64 (52%)
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 33/56 (59%)

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