Sequence 1: | XP_038934528.1 | Gene: | Atp2b1 / 29598 | RGDID: | 621303 | Length: | 1258 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014689.3 | Gene: | PMCA / 43787 | FlyBaseID: | FBgn0259214 | Length: | 1255 | Species: | Drosophila melanogaster |
Alignment Length: | 1258 | Identity: | 744/1258 - (59%) |
---|---|---|---|
Similarity: | 909/1258 - (72%) | Gaps: | 85/1258 - (6%) |
- Green bases have known domain annotations that are detailed below.
Rat 21 ANHDG---DFGITLAELRALMELRSTDALRKIQESYGDVYGICTKLKTSPNEGLSGNPADLERRE 82
Rat 83 AVFGKNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQPPEGDNALCGEVSVGEEEG 147
Rat 148 EGETGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRGGQVIQIPVADITV 212
Rat 213 GDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLDKDPLLLSGTHVMEGSGRMVVTA 277
Rat 278 VGVNSQTGIIFTLLGAGGEEEE---KKDEKKKEKKNKKQDGAIENRNKAKAQDGAA------MEM 333
Rat 334 QPLKSEEGGDGDEKDKKKANLP------------KKEKSVLQGKLTKLAVQIGKAGLLMSAITVI 386
Rat 387 ILVLYFVIDTFWVQKRPWLAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMM 451
Rat 452 KDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVT 516
Rat 517 GISVNCAYTSKILPPEKEGGLPRHVGNKTECALLGFLLDLKRDYQDVRNEIPEEALYKVYTFNSV 581
Rat 582 RKSMSTVLKNSDGSFRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLR 646
Rat 647 TICLAFRDFPAG---------EPEPEWDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQRAGI 702
Rat 703 TVRMVTGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Rat 768 SSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTD 832
Rat 833 DNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTL 897
Rat 898 ASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNA 962
Rat 963 PLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFG 1027
Rat 1028 GKPFSCSELSIEQWLWSIFLGMGTLLWGQLISTIPTSRLKFLKEAGHGTQKEEIPEEELAED-VE 1091
Rat 1092 EIDHAERELRRGQILWFRGLNRIQTQMDVVNAFQSGGSIQGALRRQPSIASQH------------ 1144
Rat 1145 ----HDVTNVS--TPTHIRVVNAFRSSLYEGLEKPESRSSIHNFMTHPEFRIEDSEPHIPLIDDT 1203
Rat 1204 DAEDDAPTKRNSSPPPSPNKNNN 1226 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Atp2b1 | XP_038934528.1 | ATPase-IIB_Ca | 15..1064 | CDD:273668 | 699/1075 (65%) |
ATP_Ca_trans_C | 1103..1187 | CDD:403580 | 27/101 (27%) | ||
PMCA | NP_001014689.3 | ATPase-IIB_Ca | 1..1057 | CDD:273668 | 699/1075 (65%) |
Cation_ATPase_N | 36..104 | CDD:279080 | 46/68 (68%) | ||
E1-E2_ATPase | 172..448 | CDD:278548 | 173/288 (60%) | ||
Cation_ATPase | 505..598 | CDD:289987 | 53/92 (58%) | ||
HAD_like | 676..807 | CDD:119389 | 110/130 (85%) | ||
Cation_ATPase_C | 873..1051 | CDD:279079 | 120/177 (68%) | ||
ATP_Ca_trans_C | 1096..1142 | CDD:289209 | 20/48 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 256 | 1.000 | Domainoid score | I1961 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1376 | 1.000 | Inparanoid score | I115 |
OMA | 1 | 1.010 | - | - | QHG53587 | |
OrthoDB | 1 | 1.010 | - | - | D115892at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000362 | |
OrthoInspector | 1 | 1.000 | - | - | otm44563 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100143 | |
Panther | 1 | 1.100 | - | - | O | PTHR24093 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X220 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.980 |