Sequence 1: | XP_038941702.1 | Gene: | Pecam1 / 29583 | RGDID: | 61927 | Length: | 726 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608822.1 | Gene: | bdl / 33635 | FlyBaseID: | FBgn0028482 | Length: | 719 | Species: | Drosophila melanogaster |
Alignment Length: | 447 | Identity: | 84/447 - (18%) |
---|---|---|---|
Similarity: | 158/447 - (35%) | Gaps: | 121/447 - (27%) |
- Green bases have known domain annotations that are detailed below.
Rat 2 LLALLLTMLLYASLQAQENSFTINSIHMESRPSWEVSNGQKLTLQCLVDISTTSKSRPQHQVLFY 66
Rat 67 KDDALVY-----NVSSSE-----------HTE----SFVIPQSRVFHAGKYKCTVILNSKEKTT- 110
Rat 111 ---IEYQLTVNGVPMPEVTVDKKEVTEGGIVTVNCSMQ--EEKPPIYFK----IEKVELGTKNVK 166
Rat 167 LSREKTSNMNFVLIEFPIEEQDHLLVFRCQAGVLSGIKMQTSE-FIRSEYVTVQEFFSTPKFQIQ 230
Rat 231 PPEMIIEGNQ-----LHIKCSVQVAHLAQEFPEIIIQKDKAIVATSKQSKEAVYSV-----MALV 285
Rat 286 E--HSGHYTCKVESNRISKASSILVNITELFPRPKLELSSSRL---DQGEMLDLSCSV------- 338
Rat 339 ---------SGAPV---------ANFTIQKEETVLSQYQNFSKIAEERDSGLYSCTA 377 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pecam1 | XP_038941702.1 | Ig | 33..117 | CDD:416386 | 20/107 (19%) |
Ig strand A' | 36..38 | CDD:409353 | 1/1 (100%) | ||
Ig strand B | 42..54 | CDD:409353 | 2/11 (18%) | ||
Ig strand C | 61..67 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 70..78 | CDD:409353 | 1/12 (8%) | ||
Ig strand E | 82..86 | CDD:409353 | 2/7 (29%) | ||
Ig strand F | 96..101 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 107..117 | CDD:409353 | 2/13 (15%) | ||
Ig_2 | 316..389 | CDD:404734 | 18/90 (20%) | ||
Ig_C17orf99 | 412..469 | CDD:407611 | |||
Ig | 501..575 | CDD:416386 | |||
bdl | NP_608822.1 | IG_like | 42..128 | CDD:214653 | 17/87 (20%) |
Ig | 43..131 | CDD:299845 | 18/89 (20%) | ||
I-set | 153..242 | CDD:254352 | 15/96 (16%) | ||
Ig | 157..242 | CDD:299845 | 15/92 (16%) | ||
Ig_2 | 252..337 | CDD:290606 | 19/92 (21%) | ||
IG_like | 260..327 | CDD:214653 | 15/74 (20%) | ||
I-set | 341..428 | CDD:254352 | 18/89 (20%) | ||
IGc2 | 356..419 | CDD:197706 | 17/74 (23%) | ||
FN3 | 435..524 | CDD:238020 | |||
FN3 | 554..636 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |