DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hes1 and cwo

DIOPT Version :10

Sequence 1:NP_077336.3 Gene:Hes1 / 29577 RGDID:62081 Length:281 Species:Rattus norvegicus
Sequence 2:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster


Alignment Length:330 Identity:76/330 - (23%)
Similarity:111/330 - (33%) Gaps:120/330 - (36%)


- Green bases have known domain annotations that are detailed below.


  Rat    16 ATPASVNTTPDKPKTASEHRKSSKP------IMEKRRRARINESLSQLKTLILDALKKDSSRHSK 74
            :|.|:..:..|.........|:|:.      |:|||||.|:|..|:.|..||....::..  ..:
  Fly    38 STSATAYSEDDAEYATGRRNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKG--RGR 100

  Rat    75 LEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFL------STCEGVNT 133
            :||.:|:||.::||::||        |........||:|:.:||.|..:||      ..|.    
  Fly   101 IEKTEIIEMAIRHLKHLQ--------SECQQKESDYRSGYMDCMKEAAKFLYDVHMQDFCH---- 153

  Rat   134 EVRTRLLGHL----------------ANCMTQINAMTYPGQAHPALQAPPPP-------PPSGPG 175
                ||||.|                .:|....|.....|..|   ||..||       ..:...
  Fly   154 ----RLLGRLQEHIDEMFKTDCYKSTRSCHMPDNVSASSGSPH---QAYHPPLCHLRDMLATSAS 211

  Rat   176 GPQH--------------------------APFAPPPPLVPIPGGAAPPPGSAPCKLGSQAGEAA 214
            ..:|                          |..|.....|.:..|::|         .|.||..:
  Fly   212 DVEHSQDHNDVKDLSFRNHLNQLQRSQQAAAAAAVAAAAVAVANGSSP---------ASNAGVDS 267

  Rat   215 KV-------FGGFQVVPAPDGQFAFLIPNGAFAHSGPVIPVYTSNSGTS---VGPNAVSPSSGSS 269
            ||       .||  ..||.|.                 :|..::.||::   .|.|:.|..|.||
  Fly   268 KVPLTNGGGTGG--APPAADN-----------------VPSNSTGSGSAAACAGGNSNSSGSNSS 313

  Rat   270 LTADS 274
            ..|.|
  Fly   314 NAASS 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hes1NP_077336.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44 6/33 (18%)
bHLH-O_HES1_4 33..95 CDD:381465 23/67 (34%)
Hairy_orange 109..148 CDD:462193 15/60 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..206 11/80 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..281 8/23 (35%)
WRPW motif 276..279
cwoNP_524775.1 bHLH-O_Cwo_like 62..121 CDD:381446 22/68 (32%)
ORANGE 126..168 CDD:128787 14/49 (29%)
Blue background indicates that the domain is not in the aligned region.

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