| Sequence 1: | XP_038944182.1 | Gene: | Lsamp / 29561 | RGDID: | 71102 | Length: | 378 | Species: | Rattus norvegicus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001188701.2 | Gene: | DIP-eta / 33793 | FlyBaseID: | FBgn0031725 | Length: | 450 | Species: | Drosophila melanogaster |
| Alignment Length: | 373 | Identity: | 116/373 - (31%) |
|---|---|---|---|
| Similarity: | 167/373 - (44%) | Gaps: | 72/373 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Rat 16 LSLFSLQVLAFWNQPPAEVNLSPITIPGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNS-KV 79
Rat 80 AWL------------------NRSGIIFAGHDKWSLDPRVELEKRHALEYSLRIQKVDVYDEGSY 126
Rat 127 TCSVQTQHEPKTSQV-YLIVQVPPKISN--ISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPL 188
Rat 189 GREFEGEEEYLEILG-------ITREQSGKYECKAANEVSSADVKQVKVTVNYPPTIT-ESKSNE 245
Rat 246 ATTGRQASLKCEASAVPAPDFEWYRDDTRI------NSANGLEIKSTEGQSSLTVTNVTEEHYGN 304
Rat 305 YTCVAANKLGVTNASLVLFKRVLPTVPHPIQEIGTTVHFKQKGPGSVR 352 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lsamp | XP_038944182.1 | Ig | 55..145 | CDD:416386 | 31/109 (28%) |
| FR1 | 55..71 | CDD:409353 | 5/15 (33%) | ||
| Ig strand A' | 56..62 | CDD:409353 | 2/5 (40%) | ||
| Ig strand B | 64..72 | CDD:409353 | 3/7 (43%) | ||
| CDR1 | 72..76 | CDD:409353 | 2/3 (67%) | ||
| FR2 | 77..84 | CDD:409353 | 5/25 (20%) | ||
| Ig strand C | 77..83 | CDD:409353 | 5/24 (21%) | ||
| CDR2 | 85..95 | CDD:409353 | 3/9 (33%) | ||
| Ig strand C' | 87..90 | CDD:409353 | 1/2 (50%) | ||
| Ig strand C' | 92..95 | CDD:409353 | 1/2 (50%) | ||
| FR3 | 96..131 | CDD:409353 | 6/34 (18%) | ||
| Ig strand D | 100..107 | CDD:409353 | 0/6 (0%) | ||
| Ig strand E | 110..116 | CDD:409353 | 1/5 (20%) | ||
| Ig strand F | 123..131 | CDD:409353 | 3/7 (43%) | ||
| CDR3 | 132..136 | CDD:409353 | 1/3 (33%) | ||
| Ig strand G | 136..145 | CDD:409353 | 5/9 (56%) | ||
| FR4 | 138..145 | CDD:409353 | 4/7 (57%) | ||
| Ig_3 | 148..218 | CDD:404760 | 33/78 (42%) | ||
| Ig strand A' | 155..160 | CDD:409353 | 2/4 (50%) | ||
| Ig strand B | 166..173 | CDD:409353 | 4/6 (67%) | ||
| Ig strand C | 179..184 | CDD:409353 | 3/4 (75%) | ||
| Ig strand D | 190..193 | CDD:409353 | 1/2 (50%) | ||
| Ig strand E | 197..203 | CDD:409353 | 2/5 (40%) | ||
| Ig strand F | 210..217 | CDD:409353 | 3/6 (50%) | ||
| Ig strand G | 224..232 | CDD:409353 | 1/7 (14%) | ||
| Ig_3 | 235..311 | CDD:404760 | 26/82 (32%) | ||
| Ig strand B | 252..256 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 265..269 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 290..294 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 304..309 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 318..321 | CDD:409353 | 0/2 (0%) | ||
| DIP-eta | NP_001188701.2 | Ig | 51..141 | CDD:299845 | 31/107 (29%) |
| IG_like | 51..137 | CDD:214653 | 29/103 (28%) | ||
| IG_like | 153..237 | CDD:214653 | 33/83 (40%) | ||
| Ig | 161..224 | CDD:299845 | 26/62 (42%) | ||
| IG_like | 252..335 | CDD:214653 | 26/82 (32%) | ||
| Ig | 258..333 | CDD:143165 | 24/74 (32%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166337171 | |
| Domainoid | 1 | 1.000 | 59 | 1.000 | Domainoid score | I10374 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 142 | 1.000 | Inparanoid score | I4382 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D265311at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000150 | |
| OrthoInspector | 1 | 1.000 | - | - | mtm8971 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X97 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 10 | 9.800 | |||||