DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurog2 and CG33557

DIOPT Version :9

Sequence 1:XP_008759703.1 Gene:Neurog2 / 295475 RGDID:1309061 Length:263 Species:Rattus norvegicus
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:154 Identity:46/154 - (29%)
Similarity:62/154 - (40%) Gaps:56/154 - (36%)


- Green bases have known domain annotations that are detailed below.


  Rat    21 GSASPASATLTPMSSSADEEEDEELRRPGAARGQRGAEAGQGVQGSSASGAGGCRPGRLLGLVHE 85
            ||||.        |.:|.:.||.::       ||.....||..||:.                  
  Fly    26 GSASG--------SGAAADSEDSQI-------GQEANPGGQENQGNH------------------ 57

  Rat    86 CKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTK 150
             :|||.|.                      |.|.|||.|..|:|:|.:|||.::||.|.:.||:|
  Fly    58 -RRRPPRQ----------------------KINARERYRTFNVNSAYEALRNLIPTEPMNRKLSK 99

  Rat   151 IETLRFAHNYIWALTETLRLADHC 174
            ||.:|.|.:||..|:.||.....|
  Fly   100 IEIIRLASSYITHLSSTLETGTEC 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurog2XP_008759703.1 HLH 110..169 CDD:238036 26/58 (45%)
CG33557NP_001014730.1 HLH 67..119 CDD:197674 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I5315
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.960

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