DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a2 and CG7458

DIOPT Version :9

Sequence 1:NP_113772.1 Gene:Slc22a2 / 29503 RGDID:61936 Length:593 Species:Rattus norvegicus
Sequence 2:NP_649374.1 Gene:CG7458 / 40441 FlyBaseID:FBgn0037144 Length:572 Species:Drosophila melanogaster


Alignment Length:564 Identity:157/564 - (27%)
Similarity:264/564 - (46%) Gaps:54/564 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat     2 STVDDILEHIGEFHLFQKQTFFLLA--LLSGAFTPIYVGIVFLGFTPDHHCWSPGAAKLSQRCGW 64
            :::|.||..||:|..:|...:.||.  :|..||  ..:..||...|..|.|..|.....|     
  Fly    36 NSLDAILVRIGQFGRYQIINYVLLCVPMLFNAF--FSISYVFTASTVVHRCTVPQCDSPS----- 93

  Rat    65 SQAEE--LNYTVPGLGPSDEASFLSQCMRYEVDWNQSTLDCVDPLSSLA-ADRNQLPLGPCEHGW 126
            |..||  |.:|:|     .:.|....|.||..:.:.:.....||..... .:...:....|...:
  Fly    94 SVYEEDWLGFTIP-----KKNSAWDDCHRYAANISDAISGYTDPSGQYCLKEYFTITSETCGRDF 153

  Rat   127 VYNTPGSSIVTEFNLVCAHSWMLDLFQSVVNVGFFIGAMMIGYLADRFGRKFCLLVTILINAISG 191
            .:.....:|.|||.:.|...|.|.:..::.|||.|:|..:.||.|||:||:..|.|...::|:.|
  Fly   154 KFRDEEKTISTEFGIYCEDEWKLSMVGTINNVGQFVGIPLGGYFADRYGRRTMLAVAGSVSALMG 218

  Rat   192 ALMAISPNYAWMLVFRFLQGLVSKAGWLIGYILITEFVGLGYRRMVGICYQIAFTVGLLILAGVA 256
            .:.::|.||:..|||.||...|....:...::|..|.||...|........|.:.:|...|..:|
  Fly   219 VIRSLSSNYSMFLVFEFLDMAVGSTLFPTAFLLAIELVGPKRRVAAATIITIFYALGEAFLGFLA 283

  Rat   257 YVIPNWRWLQFAVTLPNFCFLLYFWCIPESPRWLISQNKIVKAMKIIKHIAKKNGKSVPVSLQN- 320
            ..:.:||||...:..|....:|:.|.:|||.|||:||....||..:::..|:.|.:.:|....| 
  Fly   284 SQVQHWRWLLRVLYAPAVLQILFLWILPESVRWLLSQGAEEKASNVLRRAARINQRPLPEEQLND 348

  Rat   321 -LTPDEDAGKKLKPSILDLVRTPQIRKHTLILMYN---------WFTSSVLYQGLIMHMGLAGDN 375
             ||.:.....:...|...::|.        ::.::         |||.:::..||.::....|.|
  Fly   349 LLTSNRQKLSQANESQYPIMRA--------VVFFSLRIANCCLCWFTHTLIALGLSLNSVNLGGN 405

  Rat   376 IYLDFFYSALVEFPAAFIIILTIDRVGRRYPWAVSNMVAGAACL-ASVFIPDDLQWLKITIACLG 439
            .|.:|..:..::.|...:.::.:||||||:....| |:..|.|: ||..:|.|.....:.:..:|
  Fly   406 KYTNFMLNGFIQIPGLLLPLVIMDRVGRRHSLCAS-MLLCAICMGASAAVPADNYAGSLALFLIG 469

  Rat   440 RMGITMAYEMVCLVNAELYPTYIRNLGVLVCSSMCDIGGIITP-------FLVYRLTDIWMEFPL 497
            ::.||.:::::....:|::||.:||..:.:||.:..||.::.|       :.:|.        |.
  Fly   470 KLAITCSFQILYFFTSEIFPTNVRNTLLSLCSMVGRIGSMLAPQTPLLAKYYIYA--------PQ 526

  Rat   498 VVFAVVGLVAGALVLLLPETKGKALPETIEDAENM-QRPRKKER 540
            ::||...|::|.|.|..|||..|.||.|||:|.:: |..|:.||
  Fly   527 ILFATFALISGFLTLAFPETADKVLPTTIEEARDLNQAKRRSER 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a2NP_113772.1 2A0119 12..525 CDD:273328 145/536 (27%)
MFS 125..492 CDD:119392 104/385 (27%)
CG7458NP_649374.1 2A0119 46..554 CDD:273328 145/536 (27%)
MFS 161..544 CDD:119392 111/399 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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