DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a2 and SLC22A

DIOPT Version :9

Sequence 1:NP_113772.1 Gene:Slc22a2 / 29503 RGDID:61936 Length:593 Species:Rattus norvegicus
Sequence 2:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster


Alignment Length:573 Identity:158/573 - (27%)
Similarity:263/573 - (45%) Gaps:74/573 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 TVDDILEHIGEFHLFQKQTFFLLAL---LSGAFTPIYVGIVFLGFTPDHHCWSPGAAKLSQRCGW 64
            |:|.||:|:|:|..||...|.|:.|   ....|:..||      ||         ||.::.||..
  Fly    26 TLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYV------FT---------AATVTHRCSV 75

  Rat    65 SQAE---------ELNYTVPGLGPSDEASFLSQCMRYE----VDWNQSTLDCVDPLSSLAADRNQ 116
            .:.:         ..|:::|..|..     |..|.||.    ..||.|...|       :||...
  Fly    76 EECDLPGSNYYEPHTNWSIPKNGKD-----LDSCNRYTNSELPQWNHSVDIC-------SADHFT 128

  Rat   117 LPLGPCEHG-WVYNTPGSSIVTEFNLVCAHSWMLDLFQSVVNVGFFIGAMMIGYLADRFGRKFCL 180
            .....|.|. :|:.....:|..:|.:.|...|.|.:..::.|:|.|.|..:.|::|||:||.|.:
  Fly   129 KNKEACAHNEFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSI 193

  Rat   181 LVTILINAISGALMAISPNYAWMLVFRFLQGLVSKAGWLIGYILITEFVGLGYRRMVGICYQIAF 245
            .:..::.|:.|.:.:.||:|.|.|||.||..:.|...:...:::..|.||...|.:......:.:
  Fly   194 ALGGILGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFY 258

  Rat   246 TVGLLILAGVAYVIPNWRWLQFAVTLPNFCFLLYFWCIPESPRWLISQNKIVKAMKIIKHIAKKN 310
            .||.::||..|....:||.|......|:...|.|||.:|||.|||:||.|..:|..|::..|..|
  Fly   259 AVGEVLLAMSAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVN 323

  Rat   311 GKSVPVSL----------------QNLTPDEDAGKKLKPSILDLVRTPQIRKHTLILMYNWFTSS 359
            .:.:|.|:                ::..|..:|.|..|..|.:             ....|....
  Fly   324 KRELPESVLDKLVLANRDKLQQSSESRFPIREAFKNFKWRIAN-------------CSLCWIVHV 375

  Rat   360 VLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFIIILTIDRVGRRYPWAVSNMVAGAACLASVFI 424
            ::|.||.:::.|...:.|.:|.|.||||.|..|:.:|.:||.||||......:.:|..|:.::|.
  Fly   376 LVYYGLSLNVVLLDGDKYNNFAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFT 440

  Rat   425 PDDLQWLKITIACLGRMGITMAYEMVCLVNAELYPTYIRNLGVLVCSSMCDIGGIITPFLVYRLT 489
            ..|...|::.:..:|::.||.:::::....:|:|||.:||..:..||.|...|.::.| ....|.
  Fly   441 GADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAP-QTPLLA 504

  Rat   490 DIWMEFPLVVFAVVGLVAGALVLLLPETKGKALPETIEDAENMQRPRKKERKE 542
            ..:...|.::||...:|:|.|.|..|||....||.|:::|:.:...::.:.|:
  Fly   505 KYYANAPAMLFAGAAIVSGLLTLFFPETTNVVLPTTVQEADAIGVKKQSKSKD 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a2NP_113772.1 2A0119 12..525 CDD:273328 150/545 (28%)
MFS 125..492 CDD:119392 107/383 (28%)
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 150/545 (28%)
MFS 146..530 CDD:119392 113/397 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

Return to query results.
Submit another query.