DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a2 and CG4630

DIOPT Version :9

Sequence 1:NP_113772.1 Gene:Slc22a2 / 29503 RGDID:61936 Length:593 Species:Rattus norvegicus
Sequence 2:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster


Alignment Length:579 Identity:172/579 - (29%)
Similarity:274/579 - (47%) Gaps:71/579 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat     5 DDILEHIGEFHLFQKQTFFLLALLSGAFTPIY------VGIVFLGFTPDHHCWSPGAAKL---SQ 60
            ||||..||||..||::.:.|:.|      |:.      :..||...:|.:.|:.|...||   ..
  Fly    16 DDILVEIGEFGRFQRRNYLLICL------PVLFAAANSLSYVFTAGSPTYRCYVPECDKLVDAEY 74

  Rat    61 RCGWSQAEELNYTVPGLGPSDEASFL-SQCMRYEV--DWNQSTLD--CVDPLSSLAADRNQLPLG 120
            ...|     ::..||| ..|....|. |.|.|:..  |..:|:.|  ...||....|:.......
  Fly    75 GANW-----VSIAVPG-SWSKRGHFTPSTCERFVANGDHLESSSDPWSAWPLDQCFAENFTTETE 133

  Rat   121 PCEHGWVYNTPGSSIVTEFNLVCAHS-WMLDLFQSVVNVGFFIGAMMIGYLADRFGRKFCLLVTI 184
            .|.. :||.:...:||.::.|.|..: |.|....::...|..:|..:.||||||:|||...|..|
  Fly   134 RCNQ-FVYGSSERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCI 197

  Rat   185 LINAISGALMAISPNYAWMLVFRFLQGLVSKAGWLIGYILITEFVGLGYRRMVGICYQIAFTVGL 249
            :..|::|...|:|.:|...|.|..|..:.:...:.:.:|:..|.||...|.|..|.....:.||.
  Fly   198 VFMALTGVAQALSWDYISFLFFALLNAVGTSGVYPLAFIIGVEMVGPRKREMSSIVLNYFYAVGE 262

  Rat   250 LILAGVAYVIPNWRWLQFAVTLPNFCFLLYFWCIPESPRWLISQNKIVKAMKIIKHIAKKNGKSV 314
            .:| |::..:|:||.||.|:::|....:.|||.:|||.|||:::|:..:|..||:..||.|.:.:
  Fly   263 ALL-GLSVFLPDWRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAGVIIRRAAKVNRRDI 326

  Rat   315 PVSL------QNLTPDEDAGK--------------KLKPSILDLVRTPQIRKHTLILMYNWFTSS 359
            .|.|      |.|  |.:.|:              |:..::.::.|:..:.....||:..|..::
  Fly   327 SVELMASFKQQEL--DAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHILMGRYAILLLIWAVNA 389

  Rat   360 VLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFIIILTIDRVGRRYPWAVSNMVAGAACLASVFI 424
            ::|.||.::......|.||:|....|||.|...:..|.:.|.|||...:.|.::....|:||.|:
  Fly   390 IVYYGLSLNATSLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGSLLLCSITCVASGFV 454

  Rat   425 P-------------------DDLQWLKITIACLGRMGITMAYEMVCLVNAELYPTYIRNLGVLVC 470
            .                   ....||.:|:..:|::|||.::.::....||:.||.||:.||.|.
  Fly   455 TLAQGDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAEMMPTVIRSGGVGVM 519

  Rat   471 SSMCDIGGIITPFLVYRLTDIWMEFPLVVFAVVGLVAGALVLLLPETKGKALPETIEDA 529
            |:....|.::.|| |..|...:...||::|..:.||||.|.||||||..:.||:|:|:|
  Fly   520 STFARFGAMLAPF-VPLLASYYDPLPLLLFGTLSLVAGLLSLLLPETFNRKLPDTVEEA 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a2NP_113772.1 2A0119 12..525 CDD:273328 164/566 (29%)
MFS 125..492 CDD:119392 117/406 (29%)
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 164/566 (29%)
MFS 158..533 CDD:119392 109/378 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

Return to query results.
Submit another query.