DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a2 and CarT

DIOPT Version :9

Sequence 1:NP_113772.1 Gene:Slc22a2 / 29503 RGDID:61936 Length:593 Species:Rattus norvegicus
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:625 Identity:190/625 - (30%)
Similarity:307/625 - (49%) Gaps:84/625 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat     4 VDDILEHIGEFHLFQKQTFFLLALLS------GAFTPIYVGIVFLGFTPDHH-CWSPGA--AKLS 59
            :||:|..||||..:||...|.:.|.:      .||..:     |:..|||.: |..|..  ..|.
  Fly    36 LDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQL-----FMADTPDDYWCRIPELLDLPLE 95

  Rat    60 QRCGWSQAEELNYTVPGLGPSDEASFLSQCMRYEVDWNQ-------STLDCVDPLSSLAADRNQL 117
            ||...|..:||:        :||..: |:|..|.|:|.|       ..|..::|.:|       .
  Fly    96 QRKSLSIPKELD--------NDELVY-SKCYTYGVNWTQLLESGEEDDLTTMEPNAS-------W 144

  Rat   118 PLGPCEHGWVYNTP--GSSIVTEFNLVCAHSWMLDLFQSV----VNVGFFIGAMMIGYLADRFGR 176
            ||..|..||.|||.  .||||.:|:|||..    |::.::    :|.|..:|..:.|.|.||.||
  Fly   145 PLIKCPQGWEYNTSVVWSSIVIDFDLVCDQ----DIYPTIGLAALNTGGPVGVYLFGLLNDRGGR 205

  Rat   177 K---FCLLVTILINAISGALM-AISPNYAWMLVFRFLQGLVSKAGWLIGYILITEFVGLGYRRMV 237
            :   |..|.|:|    :|:|| ::|.::......|.:.||...|.:.|.:|:..|.||..||..|
  Fly   206 RLSYFVCLATLL----AGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFV 266

  Rat   238 GICYQIAFTVGLLILAGVAYVIPNWRWLQFAVTLPNFCFLLYFWCIPESPRWLISQNKIVKAMKI 302
            .:.....:|.|:::|:||.|:..:|..|.:..:||.:.:.||.:.:|||||||:.:.::.:|:||
  Fly   267 TVMTCTFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKI 331

  Rat   303 IKHIAKKNGKSVPVSLQNLTPDEDAGKKLKP--------SILDLVRTPQIRKHTLILMYNWFTSS 359
            ::.:||.||:..|.::......:....|||.        .:.||.|||.:|..|:::..:||.:.
  Fly   332 LERMAKVNGREFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANE 396

  Rat   360 VLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFIIILTIDRVGRRYPWAVSNMVAGAACLASVFI 424
            .:|.||..:....|.|.|:.||.||:||.|:.......:|..|||:|.::|.::.|.||:.:|.:
  Fly   397 TVYLGLSYYGPALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVML 461

  Rat   425 PDDLQWLKITIACLGRMGITMAYEMVCLVNAELYPTYIRNLGVLVCSSMCDIGGIITPFLVYRLT 489
            |||.....:.:..:.:..::.::.::.....|||||.:|.:|:...|.:..:|.|..||:.|...
  Fly   462 PDDAVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGK 526

  Rat   490 DIWMEFPLVVFAVVGLVAGALVLLLPETKGKALPETIEDAE----NMQ-----RPRKKERKENLP 545
            |. ::.|||:...:.::.|...|.||||....||:|||:.|    |.|     |..:|       
  Fly   527 DN-LKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCCRCAQK------- 583

  Rat   546 PSQASRPSAKLKRKGIIAAGADFALS---EARDGASLSPP 582
            |...|:| |..:...::|..:..|..   |.||...:..|
  Fly   584 PEILSQP-ASYENLDVLAGSSTNASEVELELRDSRRVREP 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a2NP_113772.1 2A0119 12..525 CDD:273328 168/546 (31%)
MFS 125..492 CDD:119392 122/384 (32%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 168/546 (31%)
MFS 182..551 CDD:119392 113/373 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm12320
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.920

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