DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gstt2 and GstD4

DIOPT Version :9

Sequence 1:NP_036928.1 Gene:Gstt2 / 29487 RGDID:69362 Length:244 Species:Rattus norvegicus
Sequence 2:NP_524913.1 Gene:GstD4 / 48337 FlyBaseID:FBgn0010040 Length:215 Species:Drosophila melanogaster


Alignment Length:171 Identity:47/171 - (27%)
Similarity:81/171 - (47%) Gaps:8/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LELYLDLLSQPSRAVYIFAKKNGIPFQLRTVDLLKGQHLSEQFSQVNCLKKVPVLKDGSFVLTES 67
            ::.|....|..||.:.:.||..|:....:.:.:.:|:||..:|.::|....:|.|.|..|.:.||
  Fly     1 MDFYYSPRSSGSRTIIMVAKALGLELNKKQLRITEGEHLKPEFLKLNPQHTIPTLVDNGFAIWES 65

  Rat    68 TAILIYLSSKYQVADHWYPADLQARAQVHEYLGWHADNIRGTFGVLLWTKVLGPLIGVQVPEEKV 132
            .||.:||..||...|..:|.|.|.||.:::.|.:....:..:|....:..:....:|.....:||
  Fly    66 RAIAVYLVEKYGKDDSLFPNDPQKRALINQRLYFDMGTLHDSFMKYYYPFIRTGQLGNAENYKKV 130

  Rat   133 ERNRNSMVLALQRLEDKFLRDRAFIAGQQVTLADLMSLEEL 173
            |        |.....|.||..:.::||.|:|:||:..|..:
  Fly   131 E--------AAFEFLDIFLEGQDYVAGSQLTVADIAILSSV 163

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt2NP_036928.1 GST_N_Theta 3..78 CDD:239348 22/74 (30%)